Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8378 | 25357;25358;25359 | chr2:178717742;178717741;178717740 | chr2:179582469;179582468;179582467 |
N2AB | 8061 | 24406;24407;24408 | chr2:178717742;178717741;178717740 | chr2:179582469;179582468;179582467 |
N2A | 7134 | 21625;21626;21627 | chr2:178717742;178717741;178717740 | chr2:179582469;179582468;179582467 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.473 | N | 0.395 | 0.25 | 0.417334834585 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99661E-07 | 1.16069E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4687 | ambiguous | 0.5293 | ambiguous | -0.782 | Destabilizing | 0.029 | N | 0.329 | neutral | None | None | None | None | I |
A/D | 0.3057 | likely_benign | 0.3892 | ambiguous | -0.884 | Destabilizing | 0.804 | D | 0.536 | neutral | None | None | None | None | I |
A/E | 0.2613 | likely_benign | 0.3363 | benign | -0.902 | Destabilizing | 0.813 | D | 0.47 | neutral | N | 0.440799957 | None | None | I |
A/F | 0.2757 | likely_benign | 0.3317 | benign | -0.745 | Destabilizing | 0.964 | D | 0.551 | neutral | None | None | None | None | I |
A/G | 0.1671 | likely_benign | 0.2002 | benign | -0.884 | Destabilizing | 0.232 | N | 0.417 | neutral | D | 0.523746628 | None | None | I |
A/H | 0.3654 | ambiguous | 0.4427 | ambiguous | -0.872 | Destabilizing | 0.982 | D | 0.524 | neutral | None | None | None | None | I |
A/I | 0.1741 | likely_benign | 0.1978 | benign | -0.151 | Destabilizing | 0.885 | D | 0.479 | neutral | None | None | None | None | I |
A/K | 0.3497 | ambiguous | 0.4532 | ambiguous | -1.006 | Destabilizing | 0.08 | N | 0.307 | neutral | None | None | None | None | I |
A/L | 0.1505 | likely_benign | 0.1761 | benign | -0.151 | Destabilizing | 0.046 | N | 0.315 | neutral | None | None | None | None | I |
A/M | 0.2002 | likely_benign | 0.2261 | benign | -0.32 | Destabilizing | 0.982 | D | 0.499 | neutral | None | None | None | None | I |
A/N | 0.2187 | likely_benign | 0.2517 | benign | -0.817 | Destabilizing | 0.325 | N | 0.557 | neutral | None | None | None | None | I |
A/P | 0.5645 | likely_pathogenic | 0.6861 | pathogenic | -0.275 | Destabilizing | 0.957 | D | 0.531 | neutral | N | 0.486719968 | None | None | I |
A/Q | 0.291 | likely_benign | 0.357 | ambiguous | -0.93 | Destabilizing | 0.982 | D | 0.531 | neutral | None | None | None | None | I |
A/R | 0.2884 | likely_benign | 0.3851 | ambiguous | -0.66 | Destabilizing | 0.046 | N | 0.367 | neutral | None | None | None | None | I |
A/S | 0.0903 | likely_benign | 0.0952 | benign | -1.131 | Destabilizing | 0.045 | N | 0.417 | neutral | N | 0.451075666 | None | None | I |
A/T | 0.0742 | likely_benign | 0.0745 | benign | -1.043 | Destabilizing | 0.011 | N | 0.241 | neutral | N | 0.372596239 | None | None | I |
A/V | 0.1007 | likely_benign | 0.1138 | benign | -0.275 | Destabilizing | 0.473 | N | 0.395 | neutral | N | 0.408210323 | None | None | I |
A/W | 0.6495 | likely_pathogenic | 0.7508 | pathogenic | -1.074 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | I |
A/Y | 0.3769 | ambiguous | 0.4443 | ambiguous | -0.645 | Destabilizing | 0.323 | N | 0.444 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.