Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8384 | 25375;25376;25377 | chr2:178717724;178717723;178717722 | chr2:179582451;179582450;179582449 |
N2AB | 8067 | 24424;24425;24426 | chr2:178717724;178717723;178717722 | chr2:179582451;179582450;179582449 |
N2A | 7140 | 21643;21644;21645 | chr2:178717724;178717723;178717722 | chr2:179582451;179582450;179582449 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.969 | N | 0.302 | 0.209 | 0.282179105231 | gnomAD-4.0.0 | 4.77702E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57947E-06 | 0 | 0 |
N/S | rs1191447167 | None | 0.015 | N | 0.123 | 0.101 | 0.165133752707 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1191447167 | None | 0.015 | N | 0.123 | 0.101 | 0.165133752707 | gnomAD-4.0.0 | 3.18466E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77469E-05 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2048 | likely_benign | 0.2942 | benign | -0.839 | Destabilizing | 0.002 | N | 0.241 | neutral | None | None | None | None | I |
N/C | 0.4042 | ambiguous | 0.5416 | ambiguous | 0.025 | Stabilizing | 0.989 | D | 0.296 | neutral | None | None | None | None | I |
N/D | 0.1716 | likely_benign | 0.2416 | benign | 0.086 | Stabilizing | 0.278 | N | 0.187 | neutral | N | 0.464351607 | None | None | I |
N/E | 0.4238 | ambiguous | 0.5703 | pathogenic | 0.181 | Stabilizing | 0.459 | N | 0.174 | neutral | None | None | None | None | I |
N/F | 0.4705 | ambiguous | 0.6193 | pathogenic | -0.608 | Destabilizing | 0.982 | D | 0.403 | neutral | None | None | None | None | I |
N/G | 0.284 | likely_benign | 0.3852 | ambiguous | -1.165 | Destabilizing | 0.81 | D | 0.223 | neutral | None | None | None | None | I |
N/H | 0.1127 | likely_benign | 0.1457 | benign | -0.702 | Destabilizing | 0.969 | D | 0.302 | neutral | N | 0.503024639 | None | None | I |
N/I | 0.2184 | likely_benign | 0.3169 | benign | -0.015 | Destabilizing | 0.013 | N | 0.271 | neutral | N | 0.492095569 | None | None | I |
N/K | 0.3819 | ambiguous | 0.5358 | ambiguous | -0.007 | Destabilizing | 0.061 | N | 0.115 | neutral | N | 0.468255917 | None | None | I |
N/L | 0.2225 | likely_benign | 0.3195 | benign | -0.015 | Destabilizing | 0.543 | D | 0.255 | neutral | None | None | None | None | I |
N/M | 0.3343 | likely_benign | 0.4505 | ambiguous | 0.253 | Stabilizing | 0.953 | D | 0.311 | neutral | None | None | None | None | I |
N/P | 0.832 | likely_pathogenic | 0.894 | pathogenic | -0.261 | Destabilizing | 0.715 | D | 0.359 | neutral | None | None | None | None | I |
N/Q | 0.3543 | ambiguous | 0.4795 | ambiguous | -0.534 | Destabilizing | 0.183 | N | 0.162 | neutral | None | None | None | None | I |
N/R | 0.3462 | ambiguous | 0.4935 | ambiguous | -0.003 | Destabilizing | 0.885 | D | 0.148 | neutral | None | None | None | None | I |
N/S | 0.0651 | likely_benign | 0.0759 | benign | -0.703 | Destabilizing | 0.015 | N | 0.123 | neutral | N | 0.431641756 | None | None | I |
N/T | 0.1045 | likely_benign | 0.1315 | benign | -0.405 | Destabilizing | 0.019 | N | 0.114 | neutral | N | 0.416096301 | None | None | I |
N/V | 0.2366 | likely_benign | 0.3356 | benign | -0.261 | Destabilizing | 0.091 | N | 0.291 | neutral | None | None | None | None | I |
N/W | 0.76 | likely_pathogenic | 0.8628 | pathogenic | -0.339 | Destabilizing | 0.1 | N | 0.277 | neutral | None | None | None | None | I |
N/Y | 0.1873 | likely_benign | 0.2596 | benign | -0.136 | Destabilizing | 0.976 | D | 0.401 | neutral | N | 0.515319145 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.