Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8400 | 25423;25424;25425 | chr2:178717676;178717675;178717674 | chr2:179582403;179582402;179582401 |
N2AB | 8083 | 24472;24473;24474 | chr2:178717676;178717675;178717674 | chr2:179582403;179582402;179582401 |
N2A | 7156 | 21691;21692;21693 | chr2:178717676;178717675;178717674 | chr2:179582403;179582402;179582401 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | None | None | 0.999 | D | 0.718 | 0.612 | 0.888760345717 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8059 | likely_pathogenic | 0.8134 | pathogenic | -1.872 | Destabilizing | 0.951 | D | 0.488 | neutral | None | None | None | None | N |
L/C | 0.8688 | likely_pathogenic | 0.8649 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
L/D | 0.9917 | likely_pathogenic | 0.9935 | pathogenic | -1.862 | Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
L/E | 0.9137 | likely_pathogenic | 0.9328 | pathogenic | -1.642 | Destabilizing | 0.99 | D | 0.792 | deleterious | None | None | None | None | N |
L/F | 0.4467 | ambiguous | 0.4609 | ambiguous | -1.117 | Destabilizing | 0.953 | D | 0.586 | neutral | D | 0.525799903 | None | None | N |
L/G | 0.9579 | likely_pathogenic | 0.964 | pathogenic | -2.358 | Highly Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
L/H | 0.8325 | likely_pathogenic | 0.8527 | pathogenic | -1.644 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
L/I | 0.1142 | likely_benign | 0.1064 | benign | -0.483 | Destabilizing | 0.002 | N | 0.296 | neutral | None | None | None | None | N |
L/K | 0.8589 | likely_pathogenic | 0.8952 | pathogenic | -1.246 | Destabilizing | 0.802 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/M | 0.2455 | likely_benign | 0.2364 | benign | -0.388 | Destabilizing | 0.86 | D | 0.611 | neutral | N | 0.508429664 | None | None | N |
L/N | 0.9559 | likely_pathogenic | 0.9602 | pathogenic | -1.642 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
L/P | 0.9427 | likely_pathogenic | 0.9442 | pathogenic | -0.926 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
L/Q | 0.6633 | likely_pathogenic | 0.7134 | pathogenic | -1.483 | Destabilizing | 0.994 | D | 0.759 | deleterious | None | None | None | None | N |
L/R | 0.7545 | likely_pathogenic | 0.8143 | pathogenic | -1.082 | Destabilizing | 0.982 | D | 0.761 | deleterious | None | None | None | None | N |
L/S | 0.9243 | likely_pathogenic | 0.9295 | pathogenic | -2.3 | Highly Destabilizing | 0.99 | D | 0.727 | prob.delet. | D | 0.555513953 | None | None | N |
L/T | 0.8419 | likely_pathogenic | 0.8369 | pathogenic | -1.929 | Destabilizing | 0.953 | D | 0.628 | neutral | None | None | None | None | N |
L/V | 0.1581 | likely_benign | 0.1495 | benign | -0.926 | Destabilizing | 0.008 | N | 0.376 | neutral | N | 0.504665008 | None | None | N |
L/W | 0.6956 | likely_pathogenic | 0.7317 | pathogenic | -1.42 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | D | 0.530029866 | None | None | N |
L/Y | 0.8365 | likely_pathogenic | 0.8578 | pathogenic | -1.058 | Destabilizing | 0.866 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.