Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8404 | 25435;25436;25437 | chr2:178717664;178717663;178717662 | chr2:179582391;179582390;179582389 |
N2AB | 8087 | 24484;24485;24486 | chr2:178717664;178717663;178717662 | chr2:179582391;179582390;179582389 |
N2A | 7160 | 21703;21704;21705 | chr2:178717664;178717663;178717662 | chr2:179582391;179582390;179582389 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1418140235 | -0.152 | None | N | 0.119 | 0.077 | 0.0138822411134 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/S | rs1418140235 | -0.152 | None | N | 0.119 | 0.077 | 0.0138822411134 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3002 | likely_benign | 0.2987 | benign | -0.656 | Destabilizing | 0.673 | D | 0.305 | neutral | None | None | None | None | N |
A/D | 0.1088 | likely_benign | 0.1157 | benign | -0.657 | Destabilizing | None | N | 0.189 | neutral | N | 0.36163094 | None | None | N |
A/E | 0.1237 | likely_benign | 0.1284 | benign | -0.819 | Destabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | N |
A/F | 0.1826 | likely_benign | 0.182 | benign | -0.885 | Destabilizing | 0.502 | D | 0.439 | neutral | None | None | None | None | N |
A/G | 0.0926 | likely_benign | 0.0947 | benign | -0.152 | Destabilizing | 0.001 | N | 0.19 | neutral | N | 0.376080317 | None | None | N |
A/H | 0.2134 | likely_benign | 0.2287 | benign | -0.211 | Destabilizing | 0.502 | D | 0.389 | neutral | None | None | None | None | N |
A/I | 0.1335 | likely_benign | 0.134 | benign | -0.299 | Destabilizing | 0.126 | N | 0.346 | neutral | None | None | None | None | N |
A/K | 0.1877 | likely_benign | 0.1947 | benign | -0.546 | Destabilizing | 0.056 | N | 0.312 | neutral | None | None | None | None | N |
A/L | 0.1103 | likely_benign | 0.1078 | benign | -0.299 | Destabilizing | 0.001 | N | 0.19 | neutral | None | None | None | None | N |
A/M | 0.1549 | likely_benign | 0.15 | benign | -0.394 | Destabilizing | 0.502 | D | 0.327 | neutral | None | None | None | None | N |
A/N | 0.1023 | likely_benign | 0.1111 | benign | -0.162 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
A/P | 0.1023 | likely_benign | 0.1047 | benign | -0.217 | Destabilizing | None | N | 0.145 | neutral | N | 0.353088814 | None | None | N |
A/Q | 0.1651 | likely_benign | 0.1682 | benign | -0.467 | Destabilizing | 0.223 | N | 0.409 | neutral | None | None | None | None | N |
A/R | 0.1762 | likely_benign | 0.1885 | benign | -0.067 | Destabilizing | 0.223 | N | 0.409 | neutral | None | None | None | None | N |
A/S | 0.0688 | likely_benign | 0.0692 | benign | -0.3 | Destabilizing | None | N | 0.119 | neutral | N | 0.360918864 | None | None | N |
A/T | 0.069 | likely_benign | 0.0696 | benign | -0.395 | Destabilizing | 0.008 | N | 0.217 | neutral | N | 0.428549365 | None | None | N |
A/V | 0.0917 | likely_benign | 0.0923 | benign | -0.217 | Destabilizing | 0.016 | N | 0.181 | neutral | N | 0.439382434 | None | None | N |
A/W | 0.4094 | ambiguous | 0.4306 | ambiguous | -1.014 | Destabilizing | 0.959 | D | 0.411 | neutral | None | None | None | None | N |
A/Y | 0.2193 | likely_benign | 0.2352 | benign | -0.67 | Destabilizing | 0.671 | D | 0.41 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.