Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8405 | 25438;25439;25440 | chr2:178717661;178717660;178717659 | chr2:179582388;179582387;179582386 |
N2AB | 8088 | 24487;24488;24489 | chr2:178717661;178717660;178717659 | chr2:179582388;179582387;179582386 |
N2A | 7161 | 21706;21707;21708 | chr2:178717661;178717660;178717659 | chr2:179582388;179582387;179582386 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs371923232 | -0.094 | 0.649 | N | 0.205 | 0.141 | 0.168933306366 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs371923232 | -0.094 | 0.649 | N | 0.205 | 0.141 | 0.168933306366 | gnomAD-4.0.0 | 1.11566E-05 | None | None | None | None | N | None | 1.33483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35637E-05 | 0 | 1.60154E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.366 | ambiguous | 0.3779 | ambiguous | -0.63 | Destabilizing | 0.705 | D | 0.365 | neutral | None | None | None | None | N |
N/C | 0.4937 | ambiguous | 0.4931 | ambiguous | 0.299 | Stabilizing | 1.0 | D | 0.523 | neutral | None | None | None | None | N |
N/D | 0.2421 | likely_benign | 0.2531 | benign | -0.311 | Destabilizing | 0.034 | N | 0.172 | neutral | N | 0.485804315 | None | None | N |
N/E | 0.6298 | likely_pathogenic | 0.6532 | pathogenic | -0.249 | Destabilizing | 0.396 | N | 0.25 | neutral | None | None | None | None | N |
N/F | 0.6358 | likely_pathogenic | 0.6285 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
N/G | 0.4121 | ambiguous | 0.419 | ambiguous | -0.949 | Destabilizing | 0.981 | D | 0.292 | neutral | None | None | None | None | N |
N/H | 0.1424 | likely_benign | 0.1493 | benign | -0.89 | Destabilizing | 0.999 | D | 0.399 | neutral | N | 0.5082571 | None | None | N |
N/I | 0.3925 | ambiguous | 0.3863 | ambiguous | 0.166 | Stabilizing | 0.997 | D | 0.479 | neutral | N | 0.485136579 | None | None | N |
N/K | 0.4957 | ambiguous | 0.5291 | ambiguous | -0.308 | Destabilizing | 0.649 | D | 0.205 | neutral | N | 0.493036932 | None | None | N |
N/L | 0.3431 | ambiguous | 0.3313 | benign | 0.166 | Stabilizing | 0.993 | D | 0.471 | neutral | None | None | None | None | N |
N/M | 0.5157 | ambiguous | 0.5102 | ambiguous | 0.625 | Stabilizing | 1.0 | D | 0.423 | neutral | None | None | None | None | N |
N/P | 0.811 | likely_pathogenic | 0.8259 | pathogenic | -0.069 | Destabilizing | 0.991 | D | 0.432 | neutral | None | None | None | None | N |
N/Q | 0.4877 | ambiguous | 0.5019 | ambiguous | -0.692 | Destabilizing | 0.996 | D | 0.357 | neutral | None | None | None | None | N |
N/R | 0.4522 | ambiguous | 0.4889 | ambiguous | -0.404 | Destabilizing | 0.989 | D | 0.357 | neutral | None | None | None | None | N |
N/S | 0.1113 | likely_benign | 0.1137 | benign | -0.671 | Destabilizing | 0.304 | N | 0.212 | neutral | N | 0.506928949 | None | None | N |
N/T | 0.2439 | likely_benign | 0.2529 | benign | -0.433 | Destabilizing | 0.896 | D | 0.306 | neutral | N | 0.515799148 | None | None | N |
N/V | 0.3707 | ambiguous | 0.3608 | ambiguous | -0.069 | Destabilizing | 0.976 | D | 0.481 | neutral | None | None | None | None | N |
N/W | 0.8682 | likely_pathogenic | 0.8777 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
N/Y | 0.246 | likely_benign | 0.2543 | benign | -0.122 | Destabilizing | 1.0 | D | 0.425 | neutral | N | 0.518186092 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.