Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8408 | 25447;25448;25449 | chr2:178717652;178717651;178717650 | chr2:179582379;179582378;179582377 |
N2AB | 8091 | 24496;24497;24498 | chr2:178717652;178717651;178717650 | chr2:179582379;179582378;179582377 |
N2A | 7164 | 21715;21716;21717 | chr2:178717652;178717651;178717650 | chr2:179582379;179582378;179582377 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs201432372 | -0.168 | 0.001 | N | 0.261 | 0.071 | None | gnomAD-2.1.1 | 3.08038E-04 | None | None | None | None | I | None | 3.35515E-03 | 1.41804E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs201432372 | -0.168 | 0.001 | N | 0.261 | 0.071 | None | gnomAD-3.1.2 | 7.42971E-04 | None | None | None | None | I | None | 2.63145E-03 | 1.31044E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78469E-04 |
T/I | rs201432372 | -0.168 | 0.001 | N | 0.261 | 0.071 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
T/I | rs201432372 | -0.168 | 0.001 | N | 0.261 | 0.071 | None | gnomAD-4.0.0 | 1.35743E-04 | None | None | None | None | I | None | 2.62667E-03 | 1.16725E-04 | None | 0 | 0 | None | 0 | 0 | 5.93436E-06 | 0 | 1.28102E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1176 | likely_benign | 0.1152 | benign | -1.135 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.48394481 | None | None | I |
T/C | 0.5162 | ambiguous | 0.5266 | ambiguous | -0.605 | Destabilizing | 0.753 | D | 0.535 | neutral | None | None | None | None | I |
T/D | 0.643 | likely_pathogenic | 0.7024 | pathogenic | -0.561 | Destabilizing | 0.039 | N | 0.483 | neutral | None | None | None | None | I |
T/E | 0.467 | ambiguous | 0.5396 | ambiguous | -0.488 | Destabilizing | 0.119 | N | 0.47 | neutral | None | None | None | None | I |
T/F | 0.3213 | likely_benign | 0.3674 | ambiguous | -1.088 | Destabilizing | 0.335 | N | 0.607 | neutral | None | None | None | None | I |
T/G | 0.3567 | ambiguous | 0.3911 | ambiguous | -1.467 | Destabilizing | 0.065 | N | 0.417 | neutral | None | None | None | None | I |
T/H | 0.3279 | likely_benign | 0.3941 | ambiguous | -1.727 | Destabilizing | 0.803 | D | 0.547 | neutral | None | None | None | None | I |
T/I | 0.2352 | likely_benign | 0.2106 | benign | -0.309 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.436527501 | None | None | I |
T/K | 0.2687 | likely_benign | 0.3341 | benign | -0.73 | Destabilizing | 0.029 | N | 0.415 | neutral | N | 0.494024122 | None | None | I |
T/L | 0.1315 | likely_benign | 0.1378 | benign | -0.309 | Destabilizing | 0.003 | N | 0.325 | neutral | None | None | None | None | I |
T/M | 0.0914 | likely_benign | 0.0942 | benign | -0.001 | Destabilizing | 0.001 | N | 0.271 | neutral | None | None | None | None | I |
T/N | 0.2075 | likely_benign | 0.2473 | benign | -0.911 | Destabilizing | 0.039 | N | 0.353 | neutral | None | None | None | None | I |
T/P | 0.3759 | ambiguous | 0.3994 | ambiguous | -0.552 | Destabilizing | 0.058 | N | 0.558 | neutral | N | 0.485972726 | None | None | I |
T/Q | 0.2839 | likely_benign | 0.3292 | benign | -0.927 | Destabilizing | 0.081 | N | 0.557 | neutral | None | None | None | None | I |
T/R | 0.2207 | likely_benign | 0.2772 | benign | -0.668 | Destabilizing | 0.001 | N | 0.333 | neutral | N | 0.489504672 | None | None | I |
T/S | 0.1495 | likely_benign | 0.1683 | benign | -1.208 | Destabilizing | None | N | 0.143 | neutral | N | 0.517570017 | None | None | I |
T/V | 0.1881 | likely_benign | 0.2035 | benign | -0.552 | Destabilizing | 0.001 | N | 0.129 | neutral | None | None | None | None | I |
T/W | 0.6426 | likely_pathogenic | 0.6861 | pathogenic | -1.056 | Destabilizing | 0.976 | D | 0.549 | neutral | None | None | None | None | I |
T/Y | 0.3238 | likely_benign | 0.3606 | ambiguous | -0.796 | Destabilizing | 0.782 | D | 0.615 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.