Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8410 | 25453;25454;25455 | chr2:178717646;178717645;178717644 | chr2:179582373;179582372;179582371 |
N2AB | 8093 | 24502;24503;24504 | chr2:178717646;178717645;178717644 | chr2:179582373;179582372;179582371 |
N2A | 7166 | 21721;21722;21723 | chr2:178717646;178717645;178717644 | chr2:179582373;179582372;179582371 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.005 | D | 0.239 | 0.275 | 0.296329037015 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8976 | likely_pathogenic | 0.9267 | pathogenic | -2.037 | Highly Destabilizing | 0.926 | D | 0.585 | neutral | None | None | None | None | N |
F/C | 0.8399 | likely_pathogenic | 0.8616 | pathogenic | -1.087 | Destabilizing | 0.999 | D | 0.655 | neutral | D | 0.536059777 | None | None | N |
F/D | 0.9709 | likely_pathogenic | 0.98 | pathogenic | -0.448 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
F/E | 0.9718 | likely_pathogenic | 0.9804 | pathogenic | -0.367 | Destabilizing | 0.964 | D | 0.66 | neutral | None | None | None | None | N |
F/G | 0.9665 | likely_pathogenic | 0.9787 | pathogenic | -2.369 | Highly Destabilizing | 0.989 | D | 0.618 | neutral | None | None | None | None | N |
F/H | 0.866 | likely_pathogenic | 0.8902 | pathogenic | -0.673 | Destabilizing | 0.929 | D | 0.58 | neutral | None | None | None | None | N |
F/I | 0.5147 | ambiguous | 0.5913 | pathogenic | -1.056 | Destabilizing | 0.662 | D | 0.477 | neutral | D | 0.529248448 | None | None | N |
F/K | 0.9747 | likely_pathogenic | 0.9818 | pathogenic | -1.069 | Destabilizing | 0.974 | D | 0.66 | neutral | None | None | None | None | N |
F/L | 0.9446 | likely_pathogenic | 0.9599 | pathogenic | -1.056 | Destabilizing | 0.005 | N | 0.239 | neutral | D | 0.525304066 | None | None | N |
F/M | 0.7731 | likely_pathogenic | 0.8144 | pathogenic | -0.799 | Destabilizing | 0.629 | D | 0.567 | neutral | None | None | None | None | N |
F/N | 0.9284 | likely_pathogenic | 0.9465 | pathogenic | -1.09 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
F/P | 0.9974 | likely_pathogenic | 0.9985 | pathogenic | -1.374 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
F/Q | 0.9566 | likely_pathogenic | 0.9699 | pathogenic | -1.143 | Destabilizing | 0.988 | D | 0.665 | neutral | None | None | None | None | N |
F/R | 0.9392 | likely_pathogenic | 0.955 | pathogenic | -0.456 | Destabilizing | 0.974 | D | 0.663 | neutral | None | None | None | None | N |
F/S | 0.8334 | likely_pathogenic | 0.8824 | pathogenic | -1.94 | Destabilizing | 0.985 | D | 0.609 | neutral | N | 0.505928871 | None | None | N |
F/T | 0.8502 | likely_pathogenic | 0.8926 | pathogenic | -1.763 | Destabilizing | 0.978 | D | 0.607 | neutral | None | None | None | None | N |
F/V | 0.4986 | ambiguous | 0.5661 | pathogenic | -1.374 | Destabilizing | 0.586 | D | 0.5 | neutral | N | 0.505966156 | None | None | N |
F/W | 0.7033 | likely_pathogenic | 0.7543 | pathogenic | -0.269 | Destabilizing | 0.995 | D | 0.567 | neutral | None | None | None | None | N |
F/Y | 0.3228 | likely_benign | 0.3461 | ambiguous | -0.467 | Destabilizing | 0.002 | N | 0.229 | neutral | N | 0.471989656 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.