Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8417 | 25474;25475;25476 | chr2:178717625;178717624;178717623 | chr2:179582352;179582351;179582350 |
N2AB | 8100 | 24523;24524;24525 | chr2:178717625;178717624;178717623 | chr2:179582352;179582351;179582350 |
N2A | 7173 | 21742;21743;21744 | chr2:178717625;178717624;178717623 | chr2:179582352;179582351;179582350 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs774234445 | -1.504 | 0.999 | D | 0.79 | 0.535 | 0.714281344481 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
L/F | rs774234445 | -1.504 | 0.999 | D | 0.79 | 0.535 | 0.714281344481 | gnomAD-4.0.0 | 4.7774E-06 | None | None | None | None | N | None | 0 | 2.28802E-05 | None | 0 | 0 | None | 0 | 0 | 2.85989E-06 | 0 | 3.027E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9366 | likely_pathogenic | 0.9121 | pathogenic | -2.134 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
L/C | 0.949 | likely_pathogenic | 0.9258 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/E | 0.997 | likely_pathogenic | 0.9958 | pathogenic | -2.673 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/F | 0.6722 | likely_pathogenic | 0.5841 | pathogenic | -1.334 | Destabilizing | 0.999 | D | 0.79 | deleterious | D | 0.539297986 | None | None | N |
L/G | 0.9897 | likely_pathogenic | 0.984 | pathogenic | -2.721 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/H | 0.9905 | likely_pathogenic | 0.9857 | pathogenic | -2.748 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.552175229 | None | None | N |
L/I | 0.3044 | likely_benign | 0.2661 | benign | -0.367 | Destabilizing | 0.243 | N | 0.388 | neutral | N | 0.511532493 | None | None | N |
L/K | 0.994 | likely_pathogenic | 0.9928 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/M | 0.3756 | ambiguous | 0.311 | benign | -0.706 | Destabilizing | 0.997 | D | 0.786 | deleterious | None | None | None | None | N |
L/N | 0.997 | likely_pathogenic | 0.9958 | pathogenic | -2.333 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9975 | pathogenic | -0.948 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.563531534 | None | None | N |
L/Q | 0.9813 | likely_pathogenic | 0.972 | pathogenic | -1.912 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/R | 0.9853 | likely_pathogenic | 0.9799 | pathogenic | -1.926 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.563531534 | None | None | N |
L/S | 0.9909 | likely_pathogenic | 0.9857 | pathogenic | -2.793 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/T | 0.9751 | likely_pathogenic | 0.9653 | pathogenic | -2.299 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/V | 0.3484 | ambiguous | 0.2884 | benign | -0.948 | Destabilizing | 0.923 | D | 0.748 | deleterious | D | 0.523902756 | None | None | N |
L/W | 0.9725 | likely_pathogenic | 0.9578 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/Y | 0.9732 | likely_pathogenic | 0.9638 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.