Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8424 | 25495;25496;25497 | chr2:178717604;178717603;178717602 | chr2:179582331;179582330;179582329 |
N2AB | 8107 | 24544;24545;24546 | chr2:178717604;178717603;178717602 | chr2:179582331;179582330;179582329 |
N2A | 7180 | 21763;21764;21765 | chr2:178717604;178717603;178717602 | chr2:179582331;179582330;179582329 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs370668637 | 0.573 | 0.011 | N | 0.15 | 0.033 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/E | rs370668637 | 0.573 | 0.011 | N | 0.15 | 0.033 | None | gnomAD-4.0.0 | 3.40963E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.66283E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1484 | likely_benign | 0.1357 | benign | -0.34 | Destabilizing | 0.001 | N | 0.107 | neutral | None | None | None | None | I |
Q/C | 0.5467 | ambiguous | 0.4987 | ambiguous | 0.069 | Stabilizing | 0.727 | D | 0.245 | neutral | None | None | None | None | I |
Q/D | 0.2331 | likely_benign | 0.2175 | benign | 0.141 | Stabilizing | 0.048 | N | 0.22 | neutral | None | None | None | None | I |
Q/E | 0.0829 | likely_benign | 0.0791 | benign | 0.151 | Stabilizing | 0.011 | N | 0.15 | neutral | N | 0.398245101 | None | None | I |
Q/F | 0.4767 | ambiguous | 0.4422 | ambiguous | -0.438 | Destabilizing | 0.186 | N | 0.398 | neutral | None | None | None | None | I |
Q/G | 0.1915 | likely_benign | 0.1748 | benign | -0.567 | Destabilizing | 0.036 | N | 0.275 | neutral | None | None | None | None | I |
Q/H | 0.1351 | likely_benign | 0.1275 | benign | -0.305 | Destabilizing | None | N | 0.15 | neutral | N | 0.464374092 | None | None | I |
Q/I | 0.2679 | likely_benign | 0.2417 | benign | 0.18 | Stabilizing | 0.014 | N | 0.3 | neutral | None | None | None | None | I |
Q/K | 0.0626 | likely_benign | 0.0584 | benign | 0.018 | Stabilizing | None | N | 0.076 | neutral | N | 0.360092144 | None | None | I |
Q/L | 0.1122 | likely_benign | 0.1054 | benign | 0.18 | Stabilizing | None | N | 0.116 | neutral | N | 0.377195038 | None | None | I |
Q/M | 0.2679 | likely_benign | 0.2393 | benign | 0.329 | Stabilizing | 0.003 | N | 0.092 | neutral | None | None | None | None | I |
Q/N | 0.1923 | likely_benign | 0.1837 | benign | -0.424 | Destabilizing | 0.025 | N | 0.185 | neutral | None | None | None | None | I |
Q/P | 0.0958 | likely_benign | 0.0918 | benign | 0.036 | Stabilizing | None | N | 0.131 | neutral | N | 0.366479399 | None | None | I |
Q/R | 0.0741 | likely_benign | 0.0705 | benign | 0.173 | Stabilizing | 0.016 | N | 0.213 | neutral | N | 0.382102212 | None | None | I |
Q/S | 0.1577 | likely_benign | 0.1438 | benign | -0.447 | Destabilizing | 0.036 | N | 0.143 | neutral | None | None | None | None | I |
Q/T | 0.1502 | likely_benign | 0.1327 | benign | -0.264 | Destabilizing | 0.003 | N | 0.249 | neutral | None | None | None | None | I |
Q/V | 0.1932 | likely_benign | 0.1724 | benign | 0.036 | Stabilizing | None | N | 0.125 | neutral | None | None | None | None | I |
Q/W | 0.3886 | ambiguous | 0.3259 | benign | -0.399 | Destabilizing | 0.93 | D | 0.215 | neutral | None | None | None | None | I |
Q/Y | 0.2957 | likely_benign | 0.2741 | benign | -0.147 | Destabilizing | 0.102 | N | 0.34 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.