Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8426 | 25501;25502;25503 | chr2:178717598;178717597;178717596 | chr2:179582325;179582324;179582323 |
N2AB | 8109 | 24550;24551;24552 | chr2:178717598;178717597;178717596 | chr2:179582325;179582324;179582323 |
N2A | 7182 | 21769;21770;21771 | chr2:178717598;178717597;178717596 | chr2:179582325;179582324;179582323 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1409245989 | -1.514 | 0.954 | N | 0.606 | 0.255 | 0.154104182512 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
H/Q | rs1409245989 | -1.514 | 0.954 | N | 0.606 | 0.255 | 0.154104182512 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43414E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7247 | likely_pathogenic | 0.615 | pathogenic | -1.598 | Destabilizing | 0.931 | D | 0.643 | neutral | None | None | None | None | N |
H/C | 0.5682 | likely_pathogenic | 0.4484 | ambiguous | -0.869 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
H/D | 0.3427 | ambiguous | 0.2397 | benign | -1.202 | Destabilizing | 0.003 | N | 0.424 | neutral | N | 0.367029264 | None | None | N |
H/E | 0.7421 | likely_pathogenic | 0.6318 | pathogenic | -1.023 | Destabilizing | 0.737 | D | 0.492 | neutral | None | None | None | None | N |
H/F | 0.617 | likely_pathogenic | 0.532 | ambiguous | 0.043 | Stabilizing | 0.901 | D | 0.699 | prob.neutral | None | None | None | None | N |
H/G | 0.769 | likely_pathogenic | 0.6638 | pathogenic | -2.035 | Highly Destabilizing | 0.931 | D | 0.642 | neutral | None | None | None | None | N |
H/I | 0.7504 | likely_pathogenic | 0.6529 | pathogenic | -0.328 | Destabilizing | 0.979 | D | 0.793 | deleterious | None | None | None | None | N |
H/K | 0.7846 | likely_pathogenic | 0.7108 | pathogenic | -1.014 | Destabilizing | 0.929 | D | 0.617 | neutral | None | None | None | None | N |
H/L | 0.2923 | likely_benign | 0.2475 | benign | -0.328 | Destabilizing | 0.831 | D | 0.719 | prob.delet. | N | 0.518031377 | None | None | N |
H/M | 0.7572 | likely_pathogenic | 0.6868 | pathogenic | -0.541 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
H/N | 0.1781 | likely_benign | 0.1413 | benign | -1.605 | Destabilizing | 0.04 | N | 0.317 | neutral | N | 0.50525408 | None | None | N |
H/P | 0.7478 | likely_pathogenic | 0.6211 | pathogenic | -0.738 | Destabilizing | 0.994 | D | 0.768 | deleterious | N | 0.500087282 | None | None | N |
H/Q | 0.5085 | ambiguous | 0.4106 | ambiguous | -1.246 | Destabilizing | 0.954 | D | 0.606 | neutral | N | 0.519588815 | None | None | N |
H/R | 0.53 | ambiguous | 0.4428 | ambiguous | -1.353 | Destabilizing | 0.952 | D | 0.589 | neutral | N | 0.511443587 | None | None | N |
H/S | 0.5036 | ambiguous | 0.3991 | ambiguous | -1.794 | Destabilizing | 0.931 | D | 0.593 | neutral | None | None | None | None | N |
H/T | 0.7349 | likely_pathogenic | 0.6173 | pathogenic | -1.476 | Destabilizing | 0.908 | D | 0.677 | prob.neutral | None | None | None | None | N |
H/V | 0.6891 | likely_pathogenic | 0.5839 | pathogenic | -0.738 | Destabilizing | 0.931 | D | 0.728 | prob.delet. | None | None | None | None | N |
H/W | 0.7574 | likely_pathogenic | 0.6879 | pathogenic | 0.636 | Stabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
H/Y | 0.225 | likely_benign | 0.182 | benign | 0.489 | Stabilizing | 0.041 | N | 0.297 | neutral | N | 0.511443587 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.