Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8429 | 25510;25511;25512 | chr2:178717589;178717588;178717587 | chr2:179582316;179582315;179582314 |
N2AB | 8112 | 24559;24560;24561 | chr2:178717589;178717588;178717587 | chr2:179582316;179582315;179582314 |
N2A | 7185 | 21778;21779;21780 | chr2:178717589;178717588;178717587 | chr2:179582316;179582315;179582314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs757938943 | 0.102 | 0.112 | N | 0.32 | 0.182 | 0.163833314356 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
Q/R | rs757938943 | 0.102 | 0.112 | N | 0.32 | 0.182 | 0.163833314356 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
Q/R | rs757938943 | 0.102 | 0.112 | N | 0.32 | 0.182 | 0.163833314356 | gnomAD-4.0.0 | 9.91837E-06 | None | None | None | None | N | None | 0 | 1.66806E-05 | None | 0 | 0 | None | 0 | 0 | 1.27167E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2869 | likely_benign | 0.2881 | benign | -0.471 | Destabilizing | 0.017 | N | 0.209 | neutral | None | None | None | None | N |
Q/C | 0.7838 | likely_pathogenic | 0.748 | pathogenic | 0.063 | Stabilizing | 0.987 | D | 0.509 | neutral | None | None | None | None | N |
Q/D | 0.4445 | ambiguous | 0.4507 | ambiguous | -0.924 | Destabilizing | 0.162 | N | 0.319 | neutral | None | None | None | None | N |
Q/E | 0.0966 | likely_benign | 0.0995 | benign | -0.866 | Destabilizing | 0.002 | N | 0.133 | neutral | N | 0.435818212 | None | None | N |
Q/F | 0.655 | likely_pathogenic | 0.6263 | pathogenic | -0.468 | Destabilizing | 0.859 | D | 0.563 | neutral | None | None | None | None | N |
Q/G | 0.4318 | ambiguous | 0.4234 | ambiguous | -0.779 | Destabilizing | 0.563 | D | 0.398 | neutral | None | None | None | None | N |
Q/H | 0.2396 | likely_benign | 0.2223 | benign | -0.86 | Destabilizing | 0.003 | N | 0.241 | neutral | N | 0.489346052 | None | None | N |
Q/I | 0.3021 | likely_benign | 0.289 | benign | 0.291 | Stabilizing | 0.383 | N | 0.503 | neutral | None | None | None | None | N |
Q/K | 0.1238 | likely_benign | 0.1201 | benign | -0.184 | Destabilizing | 0.005 | N | 0.153 | neutral | N | 0.466197047 | None | None | N |
Q/L | 0.1344 | likely_benign | 0.1318 | benign | 0.291 | Stabilizing | 0.162 | N | 0.384 | neutral | N | 0.474453958 | None | None | N |
Q/M | 0.3601 | ambiguous | 0.3489 | ambiguous | 0.894 | Stabilizing | 0.898 | D | 0.459 | neutral | None | None | None | None | N |
Q/N | 0.3086 | likely_benign | 0.307 | benign | -0.728 | Destabilizing | 0.319 | N | 0.312 | neutral | None | None | None | None | N |
Q/P | 0.2455 | likely_benign | 0.241 | benign | 0.068 | Stabilizing | 0.589 | D | 0.455 | neutral | N | 0.487921282 | None | None | N |
Q/R | 0.1328 | likely_benign | 0.129 | benign | -0.076 | Destabilizing | 0.112 | N | 0.32 | neutral | N | 0.483188084 | None | None | N |
Q/S | 0.3254 | likely_benign | 0.3226 | benign | -0.759 | Destabilizing | 0.392 | N | 0.293 | neutral | None | None | None | None | N |
Q/T | 0.2261 | likely_benign | 0.2198 | benign | -0.52 | Destabilizing | 0.048 | N | 0.387 | neutral | None | None | None | None | N |
Q/V | 0.2252 | likely_benign | 0.2204 | benign | 0.068 | Stabilizing | 0.005 | N | 0.314 | neutral | None | None | None | None | N |
Q/W | 0.5473 | ambiguous | 0.5053 | ambiguous | -0.397 | Destabilizing | 0.997 | D | 0.519 | neutral | None | None | None | None | N |
Q/Y | 0.4819 | ambiguous | 0.4493 | ambiguous | -0.106 | Destabilizing | 0.753 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.