Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8430 | 25513;25514;25515 | chr2:178717586;178717585;178717584 | chr2:179582313;179582312;179582311 |
N2AB | 8113 | 24562;24563;24564 | chr2:178717586;178717585;178717584 | chr2:179582313;179582312;179582311 |
N2A | 7186 | 21781;21782;21783 | chr2:178717586;178717585;178717584 | chr2:179582313;179582312;179582311 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2077680471 | None | 1.0 | D | 0.866 | 0.866 | 0.812860075013 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88184E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs2077680471 | None | 1.0 | D | 0.866 | 0.866 | 0.812860075013 | gnomAD-4.0.0 | 2.02987E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.15982E-04 | 0 | None | 0 | 0 | 1.20494E-06 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.779 | 0.774 | 0.647653543843 | gnomAD-4.0.0 | 1.36893E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -2.611 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/C | 0.97 | likely_pathogenic | 0.9587 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.556685133 | None | None | N |
Y/D | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -3.336 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.568041439 | None | None | N |
Y/E | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/F | 0.2858 | likely_benign | 0.2592 | benign | -1.029 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.511091647 | None | None | N |
Y/G | 0.9906 | likely_pathogenic | 0.9891 | pathogenic | -3.051 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/H | 0.9882 | likely_pathogenic | 0.9843 | pathogenic | -2.411 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.56753446 | None | None | N |
Y/I | 0.9019 | likely_pathogenic | 0.8836 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/K | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/L | 0.8637 | likely_pathogenic | 0.8455 | pathogenic | -1.133 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
Y/M | 0.9754 | likely_pathogenic | 0.9699 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/N | 0.9886 | likely_pathogenic | 0.9868 | pathogenic | -2.941 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.567787949 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/Q | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -2.523 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Y/R | 0.9961 | likely_pathogenic | 0.9951 | pathogenic | -2.208 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/S | 0.9942 | likely_pathogenic | 0.993 | pathogenic | -3.176 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.567787949 | None | None | N |
Y/T | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -2.789 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/V | 0.8661 | likely_pathogenic | 0.8472 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/W | 0.8652 | likely_pathogenic | 0.847 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.