Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8436 | 25531;25532;25533 | chr2:178717568;178717567;178717566 | chr2:179582295;179582294;179582293 |
N2AB | 8119 | 24580;24581;24582 | chr2:178717568;178717567;178717566 | chr2:179582295;179582294;179582293 |
N2A | 7192 | 21799;21800;21801 | chr2:178717568;178717567;178717566 | chr2:179582295;179582294;179582293 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 1.0 | N | 0.707 | 0.605 | 0.328486982098 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9879 | likely_pathogenic | 0.981 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/C | 0.9593 | likely_pathogenic | 0.9488 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
N/D | 0.9441 | likely_pathogenic | 0.9305 | pathogenic | -1.107 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.517770468 | None | None | N |
N/E | 0.9962 | likely_pathogenic | 0.995 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/F | 0.9971 | likely_pathogenic | 0.9957 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
N/G | 0.9508 | likely_pathogenic | 0.9281 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.562 | neutral | None | None | None | None | N |
N/H | 0.9002 | likely_pathogenic | 0.8473 | pathogenic | -0.998 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.514518465 | None | None | N |
N/I | 0.9793 | likely_pathogenic | 0.9736 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.537649149 | None | None | N |
N/K | 0.997 | likely_pathogenic | 0.9954 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.536888681 | None | None | N |
N/L | 0.9577 | likely_pathogenic | 0.945 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/M | 0.9877 | likely_pathogenic | 0.9835 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/P | 0.9929 | likely_pathogenic | 0.9879 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/Q | 0.9951 | likely_pathogenic | 0.9922 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
N/R | 0.996 | likely_pathogenic | 0.994 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
N/S | 0.4778 | ambiguous | 0.3869 | ambiguous | -0.89 | Destabilizing | 0.999 | D | 0.588 | neutral | N | 0.480952847 | None | None | N |
N/T | 0.8795 | likely_pathogenic | 0.8469 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.501894712 | None | None | N |
N/V | 0.9803 | likely_pathogenic | 0.9747 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
N/W | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/Y | 0.9819 | likely_pathogenic | 0.9696 | pathogenic | -0.326 | Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.537649149 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.