Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8437 | 25534;25535;25536 | chr2:178717565;178717564;178717563 | chr2:179582292;179582291;179582290 |
N2AB | 8120 | 24583;24584;24585 | chr2:178717565;178717564;178717563 | chr2:179582292;179582291;179582290 |
N2A | 7193 | 21802;21803;21804 | chr2:178717565;178717564;178717563 | chr2:179582292;179582291;179582290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1560631696 | None | 0.043 | N | 0.233 | 0.175 | 0.523702305895 | gnomAD-4.0.0 | 6.84728E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9997E-07 | 0 | 0 |
P/R | rs1560631696 | None | 0.178 | N | 0.269 | 0.204 | 0.363158594168 | gnomAD-4.0.0 | 6.84728E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9997E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0699 | likely_benign | 0.067 | benign | -0.39 | Destabilizing | None | N | 0.116 | neutral | N | 0.431143111 | None | None | I |
P/C | 0.4625 | ambiguous | 0.4718 | ambiguous | -0.756 | Destabilizing | 0.141 | N | 0.215 | neutral | None | None | None | None | I |
P/D | 0.2183 | likely_benign | 0.2196 | benign | -0.249 | Destabilizing | 0.001 | N | 0.292 | neutral | None | None | None | None | I |
P/E | 0.1621 | likely_benign | 0.1586 | benign | -0.363 | Destabilizing | None | N | 0.12 | neutral | None | None | None | None | I |
P/F | 0.287 | likely_benign | 0.2819 | benign | -0.664 | Destabilizing | 0.671 | D | 0.233 | neutral | None | None | None | None | I |
P/G | 0.2398 | likely_benign | 0.2481 | benign | -0.485 | Destabilizing | 0.012 | N | 0.281 | neutral | None | None | None | None | I |
P/H | 0.1308 | likely_benign | 0.1174 | benign | -0.038 | Destabilizing | 0.366 | N | 0.255 | neutral | D | 0.532558112 | None | None | I |
P/I | 0.1768 | likely_benign | 0.1818 | benign | -0.288 | Destabilizing | 0.223 | N | 0.229 | neutral | None | None | None | None | I |
P/K | 0.2341 | likely_benign | 0.2096 | benign | -0.412 | Destabilizing | 0.056 | N | 0.273 | neutral | None | None | None | None | I |
P/L | 0.0949 | likely_benign | 0.0884 | benign | -0.288 | Destabilizing | 0.043 | N | 0.233 | neutral | N | 0.509950611 | None | None | I |
P/M | 0.2198 | likely_benign | 0.2276 | benign | -0.472 | Destabilizing | 0.699 | D | 0.257 | neutral | None | None | None | None | I |
P/N | 0.2044 | likely_benign | 0.2082 | benign | -0.223 | Destabilizing | 0.018 | N | 0.272 | neutral | None | None | None | None | I |
P/Q | 0.1203 | likely_benign | 0.1139 | benign | -0.437 | Destabilizing | 0.097 | N | 0.293 | neutral | None | None | None | None | I |
P/R | 0.1556 | likely_benign | 0.1328 | benign | 0.074 | Stabilizing | 0.178 | N | 0.269 | neutral | N | 0.499733617 | None | None | I |
P/S | 0.0852 | likely_benign | 0.0893 | benign | -0.562 | Destabilizing | None | N | 0.109 | neutral | N | 0.419576536 | None | None | I |
P/T | 0.0836 | likely_benign | 0.0812 | benign | -0.577 | Destabilizing | 0.006 | N | 0.273 | neutral | N | 0.49182621 | None | None | I |
P/V | 0.141 | likely_benign | 0.1339 | benign | -0.29 | Destabilizing | 0.01 | N | 0.227 | neutral | None | None | None | None | I |
P/W | 0.4558 | ambiguous | 0.4465 | ambiguous | -0.733 | Destabilizing | 0.959 | D | 0.23 | neutral | None | None | None | None | I |
P/Y | 0.2694 | likely_benign | 0.2589 | benign | -0.449 | Destabilizing | 0.671 | D | 0.233 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.