Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8440 | 25543;25544;25545 | chr2:178717556;178717555;178717554 | chr2:179582283;179582282;179582281 |
N2AB | 8123 | 24592;24593;24594 | chr2:178717556;178717555;178717554 | chr2:179582283;179582282;179582281 |
N2A | 7196 | 21811;21812;21813 | chr2:178717556;178717555;178717554 | chr2:179582283;179582282;179582281 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs778495825 | 0.069 | 0.001 | N | 0.107 | 0.12 | 0.110078149338 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
T/S | rs778495825 | 0.069 | 0.001 | N | 0.107 | 0.12 | 0.110078149338 | gnomAD-4.0.0 | 1.59543E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43728E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.089 | likely_benign | 0.0866 | benign | -0.439 | Destabilizing | 0.024 | N | 0.307 | neutral | D | 0.523783913 | None | None | I |
T/C | 0.5285 | ambiguous | 0.5178 | ambiguous | -0.206 | Destabilizing | 0.993 | D | 0.488 | neutral | None | None | None | None | I |
T/D | 0.3755 | ambiguous | 0.3599 | ambiguous | 0.043 | Stabilizing | 0.193 | N | 0.395 | neutral | None | None | None | None | I |
T/E | 0.2608 | likely_benign | 0.2534 | benign | -0.053 | Destabilizing | 0.021 | N | 0.238 | neutral | None | None | None | None | I |
T/F | 0.1816 | likely_benign | 0.1803 | benign | -1.056 | Destabilizing | 0.977 | D | 0.547 | neutral | None | None | None | None | I |
T/G | 0.2981 | likely_benign | 0.2818 | benign | -0.523 | Destabilizing | 0.667 | D | 0.501 | neutral | None | None | None | None | I |
T/H | 0.2293 | likely_benign | 0.2147 | benign | -0.899 | Destabilizing | 0.941 | D | 0.54 | neutral | None | None | None | None | I |
T/I | 0.1597 | likely_benign | 0.1599 | benign | -0.339 | Destabilizing | 0.923 | D | 0.457 | neutral | D | 0.532443469 | None | None | I |
T/K | 0.1808 | likely_benign | 0.1617 | benign | -0.282 | Destabilizing | 0.527 | D | 0.395 | neutral | None | None | None | None | I |
T/L | 0.1121 | likely_benign | 0.1094 | benign | -0.339 | Destabilizing | 0.69 | D | 0.422 | neutral | None | None | None | None | I |
T/M | 0.086 | likely_benign | 0.0877 | benign | 0.007 | Stabilizing | 0.98 | D | 0.475 | neutral | None | None | None | None | I |
T/N | 0.117 | likely_benign | 0.1112 | benign | -0.027 | Destabilizing | 0.153 | N | 0.33 | neutral | D | 0.522687835 | None | None | I |
T/P | 0.2919 | likely_benign | 0.2985 | benign | -0.347 | Destabilizing | 0.72 | D | 0.445 | neutral | N | 0.484744958 | None | None | I |
T/Q | 0.2044 | likely_benign | 0.1909 | benign | -0.334 | Destabilizing | 0.039 | N | 0.247 | neutral | None | None | None | None | I |
T/R | 0.156 | likely_benign | 0.1417 | benign | -0.006 | Destabilizing | 0.856 | D | 0.439 | neutral | None | None | None | None | I |
T/S | 0.1008 | likely_benign | 0.0978 | benign | -0.223 | Destabilizing | 0.001 | N | 0.107 | neutral | N | 0.41796317 | None | None | I |
T/V | 0.1354 | likely_benign | 0.1339 | benign | -0.347 | Destabilizing | 0.614 | D | 0.339 | neutral | None | None | None | None | I |
T/W | 0.5611 | ambiguous | 0.5414 | ambiguous | -1.039 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | I |
T/Y | 0.2519 | likely_benign | 0.2428 | benign | -0.755 | Destabilizing | 0.992 | D | 0.546 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.