Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8442 | 25549;25550;25551 | chr2:178717550;178717549;178717548 | chr2:179582277;179582276;179582275 |
N2AB | 8125 | 24598;24599;24600 | chr2:178717550;178717549;178717548 | chr2:179582277;179582276;179582275 |
N2A | 7198 | 21817;21818;21819 | chr2:178717550;178717549;178717548 | chr2:179582277;179582276;179582275 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1560631528 | None | 0.998 | N | 0.61 | 0.325 | None | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
S/L | rs1560631528 | None | 0.998 | N | 0.61 | 0.325 | None | gnomAD-4.0.0 | 2.74397E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60529E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1006 | likely_benign | 0.1002 | benign | -0.753 | Destabilizing | 0.724 | D | 0.497 | neutral | N | 0.492987392 | None | None | I |
S/C | 0.2426 | likely_benign | 0.2181 | benign | -0.384 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
S/D | 0.5946 | likely_pathogenic | 0.5905 | pathogenic | 0.154 | Stabilizing | 0.983 | D | 0.473 | neutral | None | None | None | None | I |
S/E | 0.6715 | likely_pathogenic | 0.6535 | pathogenic | 0.071 | Stabilizing | 0.681 | D | 0.313 | neutral | None | None | None | None | I |
S/F | 0.1727 | likely_benign | 0.1656 | benign | -1.333 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
S/G | 0.1656 | likely_benign | 0.1596 | benign | -0.874 | Destabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | I |
S/H | 0.4241 | ambiguous | 0.3996 | ambiguous | -1.4 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
S/I | 0.1987 | likely_benign | 0.1977 | benign | -0.556 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
S/K | 0.7926 | likely_pathogenic | 0.7797 | pathogenic | -0.528 | Destabilizing | 0.851 | D | 0.315 | neutral | None | None | None | None | I |
S/L | 0.1245 | likely_benign | 0.1252 | benign | -0.556 | Destabilizing | 0.998 | D | 0.61 | neutral | N | 0.493836766 | None | None | I |
S/M | 0.2659 | likely_benign | 0.2651 | benign | -0.117 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
S/N | 0.2003 | likely_benign | 0.2021 | benign | -0.253 | Destabilizing | 0.964 | D | 0.505 | neutral | None | None | None | None | I |
S/P | 0.8078 | likely_pathogenic | 0.8013 | pathogenic | -0.594 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | D | 0.539844645 | None | None | I |
S/Q | 0.5812 | likely_pathogenic | 0.5563 | ambiguous | -0.538 | Destabilizing | 0.999 | D | 0.506 | neutral | None | None | None | None | I |
S/R | 0.6873 | likely_pathogenic | 0.6588 | pathogenic | -0.328 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
S/T | 0.0884 | likely_benign | 0.0893 | benign | -0.412 | Destabilizing | 0.953 | D | 0.499 | neutral | N | 0.493941009 | None | None | I |
S/V | 0.1878 | likely_benign | 0.1905 | benign | -0.594 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
S/W | 0.4335 | ambiguous | 0.4035 | ambiguous | -1.255 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
S/Y | 0.2184 | likely_benign | 0.2068 | benign | -1.01 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.