Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8443 | 25552;25553;25554 | chr2:178717547;178717546;178717545 | chr2:179582274;179582273;179582272 |
N2AB | 8126 | 24601;24602;24603 | chr2:178717547;178717546;178717545 | chr2:179582274;179582273;179582272 |
N2A | 7199 | 21820;21821;21822 | chr2:178717547;178717546;178717545 | chr2:179582274;179582273;179582272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs753445241 | -0.844 | 0.002 | N | 0.233 | 0.158 | 0.20549828249 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
S/A | rs753445241 | -0.844 | 0.002 | N | 0.233 | 0.158 | 0.20549828249 | gnomAD-4.0.0 | 6.86063E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16648E-05 | 0 |
S/T | None | None | 0.034 | N | 0.257 | 0.184 | 0.21737058555 | gnomAD-4.0.0 | 1.37213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80278E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1825 | likely_benign | 0.1554 | benign | -1.021 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.516297793 | None | None | N |
S/C | 0.1837 | likely_benign | 0.1402 | benign | -0.646 | Destabilizing | 0.065 | N | 0.411 | neutral | N | 0.47102965 | None | None | N |
S/D | 0.9527 | likely_pathogenic | 0.9512 | pathogenic | -0.455 | Destabilizing | 0.983 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/E | 0.9758 | likely_pathogenic | 0.9767 | pathogenic | -0.419 | Destabilizing | 0.976 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/F | 0.7847 | likely_pathogenic | 0.7552 | pathogenic | -1.156 | Destabilizing | 0.998 | D | 0.794 | deleterious | N | 0.511193779 | None | None | N |
S/G | 0.2834 | likely_benign | 0.252 | benign | -1.298 | Destabilizing | 0.918 | D | 0.669 | neutral | None | None | None | None | N |
S/H | 0.911 | likely_pathogenic | 0.9035 | pathogenic | -1.665 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/I | 0.7099 | likely_pathogenic | 0.6855 | pathogenic | -0.372 | Destabilizing | 0.991 | D | 0.788 | deleterious | None | None | None | None | N |
S/K | 0.9954 | likely_pathogenic | 0.9947 | pathogenic | -0.611 | Destabilizing | 0.991 | D | 0.72 | prob.delet. | None | None | None | None | N |
S/L | 0.4475 | ambiguous | 0.4426 | ambiguous | -0.372 | Destabilizing | 0.991 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/M | 0.6608 | likely_pathogenic | 0.6662 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
S/N | 0.7133 | likely_pathogenic | 0.7088 | pathogenic | -0.699 | Destabilizing | 0.875 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/P | 0.9845 | likely_pathogenic | 0.9809 | pathogenic | -0.556 | Destabilizing | 0.994 | D | 0.796 | deleterious | D | 0.529551523 | None | None | N |
S/Q | 0.9591 | likely_pathogenic | 0.9566 | pathogenic | -0.835 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
S/R | 0.9877 | likely_pathogenic | 0.9847 | pathogenic | -0.538 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
S/T | 0.1377 | likely_benign | 0.166 | benign | -0.726 | Destabilizing | 0.034 | N | 0.257 | neutral | N | 0.512452199 | None | None | N |
S/V | 0.5753 | likely_pathogenic | 0.5566 | ambiguous | -0.556 | Destabilizing | 0.954 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/W | 0.9136 | likely_pathogenic | 0.9089 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/Y | 0.783 | likely_pathogenic | 0.761 | pathogenic | -0.821 | Destabilizing | 0.999 | D | 0.79 | deleterious | D | 0.522968158 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.