Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8447 | 25564;25565;25566 | chr2:178717535;178717534;178717533 | chr2:179582262;179582261;179582260 |
N2AB | 8130 | 24613;24614;24615 | chr2:178717535;178717534;178717533 | chr2:179582262;179582261;179582260 |
N2A | 7203 | 21832;21833;21834 | chr2:178717535;178717534;178717533 | chr2:179582262;179582261;179582260 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.84 | 0.457 | 0.61132195657 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9607 | likely_pathogenic | 0.9513 | pathogenic | -3.102 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/C | 0.9522 | likely_pathogenic | 0.942 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -3.771 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9965 | likely_pathogenic | 0.9949 | pathogenic | -3.461 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/F | 0.8327 | likely_pathogenic | 0.7425 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.501968207 | None | None | N |
L/G | 0.991 | likely_pathogenic | 0.988 | pathogenic | -3.672 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/H | 0.9934 | likely_pathogenic | 0.9892 | pathogenic | -3.247 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.535583051 | None | None | N |
L/I | 0.2621 | likely_benign | 0.2394 | benign | -1.365 | Destabilizing | 0.997 | D | 0.595 | neutral | N | 0.478784616 | None | None | N |
L/K | 0.9944 | likely_pathogenic | 0.9923 | pathogenic | -2.476 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/M | 0.4113 | ambiguous | 0.3412 | ambiguous | -1.379 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/N | 0.9958 | likely_pathogenic | 0.9941 | pathogenic | -3.197 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/P | 0.997 | likely_pathogenic | 0.9949 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.535583051 | None | None | N |
L/Q | 0.9883 | likely_pathogenic | 0.9821 | pathogenic | -2.873 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/R | 0.9872 | likely_pathogenic | 0.9819 | pathogenic | -2.411 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.535583051 | None | None | N |
L/S | 0.9963 | likely_pathogenic | 0.9948 | pathogenic | -3.694 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/T | 0.9813 | likely_pathogenic | 0.9764 | pathogenic | -3.235 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/V | 0.2902 | likely_benign | 0.2695 | benign | -1.939 | Destabilizing | 0.998 | D | 0.595 | neutral | N | 0.518956017 | None | None | N |
L/W | 0.9773 | likely_pathogenic | 0.9579 | pathogenic | -2.329 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Y | 0.9774 | likely_pathogenic | 0.9634 | pathogenic | -2.188 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.