Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8448 | 25567;25568;25569 | chr2:178717532;178717531;178717530 | chr2:179582259;179582258;179582257 |
N2AB | 8131 | 24616;24617;24618 | chr2:178717532;178717531;178717530 | chr2:179582259;179582258;179582257 |
N2A | 7204 | 21835;21836;21837 | chr2:178717532;178717531;178717530 | chr2:179582259;179582258;179582257 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2077674998 | None | None | N | 0.109 | 0.069 | 0.224531998449 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs2077674998 | None | None | N | 0.109 | 0.069 | 0.224531998449 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | N | None | 2.41185E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3144 | likely_benign | 0.284 | benign | -1.816 | Destabilizing | 0.004 | N | 0.234 | neutral | None | None | None | None | N |
I/C | 0.6652 | likely_pathogenic | 0.6283 | pathogenic | -0.965 | Destabilizing | 0.245 | N | 0.411 | neutral | None | None | None | None | N |
I/D | 0.5673 | likely_pathogenic | 0.5254 | ambiguous | -1.336 | Destabilizing | 0.009 | N | 0.407 | neutral | None | None | None | None | N |
I/E | 0.4509 | ambiguous | 0.405 | ambiguous | -1.296 | Destabilizing | None | N | 0.224 | neutral | None | None | None | None | N |
I/F | 0.1077 | likely_benign | 0.1035 | benign | -1.182 | Destabilizing | 0.017 | N | 0.313 | neutral | N | 0.438698771 | None | None | N |
I/G | 0.5899 | likely_pathogenic | 0.5472 | ambiguous | -2.183 | Highly Destabilizing | 0.018 | N | 0.412 | neutral | None | None | None | None | N |
I/H | 0.2718 | likely_benign | 0.2569 | benign | -1.368 | Destabilizing | 0.245 | N | 0.467 | neutral | None | None | None | None | N |
I/K | 0.2764 | likely_benign | 0.2453 | benign | -1.295 | Destabilizing | 0.009 | N | 0.431 | neutral | None | None | None | None | N |
I/L | 0.0834 | likely_benign | 0.0795 | benign | -0.859 | Destabilizing | None | N | 0.051 | neutral | N | 0.458101481 | None | None | N |
I/M | 0.0963 | likely_benign | 0.0965 | benign | -0.61 | Destabilizing | 0.108 | N | 0.321 | neutral | N | 0.489117821 | None | None | N |
I/N | 0.18 | likely_benign | 0.1701 | benign | -1.139 | Destabilizing | 0.033 | N | 0.471 | neutral | N | 0.475764522 | None | None | N |
I/P | 0.8787 | likely_pathogenic | 0.8245 | pathogenic | -1.148 | Destabilizing | 0.085 | N | 0.516 | neutral | None | None | None | None | N |
I/Q | 0.2674 | likely_benign | 0.2446 | benign | -1.273 | Destabilizing | 0.001 | N | 0.273 | neutral | None | None | None | None | N |
I/R | 0.197 | likely_benign | 0.1753 | benign | -0.701 | Destabilizing | 0.022 | N | 0.523 | neutral | None | None | None | None | N |
I/S | 0.2025 | likely_benign | 0.1892 | benign | -1.765 | Destabilizing | 0.001 | N | 0.166 | neutral | N | 0.46949191 | None | None | N |
I/T | 0.1639 | likely_benign | 0.1501 | benign | -1.607 | Destabilizing | None | N | 0.109 | neutral | N | 0.396300874 | None | None | N |
I/V | 0.0913 | likely_benign | 0.0885 | benign | -1.148 | Destabilizing | None | N | 0.054 | neutral | N | 0.42298883 | None | None | N |
I/W | 0.623 | likely_pathogenic | 0.5869 | pathogenic | -1.313 | Destabilizing | 0.788 | D | 0.46 | neutral | None | None | None | None | N |
I/Y | 0.3297 | likely_benign | 0.3178 | benign | -1.09 | Destabilizing | 0.085 | N | 0.479 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.