Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8456 | 25591;25592;25593 | chr2:178717368;178717367;178717366 | chr2:179582095;179582094;179582093 |
N2AB | 8139 | 24640;24641;24642 | chr2:178717368;178717367;178717366 | chr2:179582095;179582094;179582093 |
N2A | 7212 | 21859;21860;21861 | chr2:178717368;178717367;178717366 | chr2:179582095;179582094;179582093 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1308450887 | None | 0.992 | D | 0.757 | 0.733 | 0.834275830499 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs1308450887 | None | 0.992 | D | 0.757 | 0.733 | 0.834275830499 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
P/R | None | None | 0.631 | D | 0.674 | 0.693 | 0.663271509172 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
P/T | None | None | 0.936 | D | 0.689 | 0.69 | 0.676758004843 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7181 | likely_pathogenic | 0.6969 | pathogenic | -1.33 | Destabilizing | 0.799 | D | 0.664 | neutral | D | 0.632567861 | None | None | N |
P/C | 0.9862 | likely_pathogenic | 0.9798 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.9988 | likely_pathogenic | 0.9982 | pathogenic | -1.106 | Destabilizing | 0.861 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/E | 0.9968 | likely_pathogenic | 0.9955 | pathogenic | -1.149 | Destabilizing | 0.831 | D | 0.689 | prob.neutral | None | None | None | None | N |
P/F | 0.9986 | likely_pathogenic | 0.9974 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
P/G | 0.9838 | likely_pathogenic | 0.9764 | pathogenic | -1.584 | Destabilizing | 0.984 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.9957 | likely_pathogenic | 0.9924 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.649192635 | None | None | N |
P/I | 0.9707 | likely_pathogenic | 0.9606 | pathogenic | -0.754 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
P/K | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -0.956 | Destabilizing | 0.994 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/L | 0.9212 | likely_pathogenic | 0.892 | pathogenic | -0.754 | Destabilizing | 0.992 | D | 0.757 | deleterious | D | 0.63297147 | None | None | N |
P/M | 0.9918 | likely_pathogenic | 0.988 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/N | 0.9977 | likely_pathogenic | 0.9961 | pathogenic | -0.735 | Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
P/Q | 0.9929 | likely_pathogenic | 0.9894 | pathogenic | -0.988 | Destabilizing | 0.914 | D | 0.673 | neutral | None | None | None | None | N |
P/R | 0.9911 | likely_pathogenic | 0.9866 | pathogenic | -0.461 | Destabilizing | 0.631 | D | 0.674 | neutral | D | 0.649192635 | None | None | N |
P/S | 0.9626 | likely_pathogenic | 0.9477 | pathogenic | -1.248 | Destabilizing | 0.856 | D | 0.624 | neutral | D | 0.632769665 | None | None | N |
P/T | 0.9586 | likely_pathogenic | 0.9456 | pathogenic | -1.186 | Destabilizing | 0.936 | D | 0.689 | prob.neutral | D | 0.648990831 | None | None | N |
P/V | 0.9176 | likely_pathogenic | 0.8921 | pathogenic | -0.912 | Destabilizing | 0.63 | D | 0.661 | neutral | None | None | None | None | N |
P/W | 0.9996 | likely_pathogenic | 0.9991 | pathogenic | -1.36 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/Y | 0.9989 | likely_pathogenic | 0.9979 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.