Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8462 | 25609;25610;25611 | chr2:178717350;178717349;178717348 | chr2:179582077;179582076;179582075 |
N2AB | 8145 | 24658;24659;24660 | chr2:178717350;178717349;178717348 | chr2:179582077;179582076;179582075 |
N2A | 7218 | 21877;21878;21879 | chr2:178717350;178717349;178717348 | chr2:179582077;179582076;179582075 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs1249885767 | -1.095 | 0.999 | N | 0.705 | 0.386 | 0.422404719673 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.05002E-04 | None | 0 | None | 0 | 0 | 0 |
P/H | rs1249885767 | -1.095 | 0.999 | N | 0.705 | 0.386 | 0.422404719673 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 5.77145E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/H | rs1249885767 | -1.095 | 0.999 | N | 0.705 | 0.386 | 0.422404719673 | gnomAD-4.0.0 | 4.96379E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.56118E-04 | None | 0 | 0 | 0 | 0 | 1.60303E-05 |
P/S | None | None | 0.878 | N | 0.59 | 0.303 | 0.188950314367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2529 | likely_benign | 0.1338 | benign | -1.587 | Destabilizing | 0.053 | N | 0.385 | neutral | N | 0.470534821 | None | None | I |
P/C | 0.9421 | likely_pathogenic | 0.8792 | pathogenic | -0.967 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | I |
P/D | 0.9906 | likely_pathogenic | 0.9801 | pathogenic | -1.331 | Destabilizing | 0.905 | D | 0.663 | neutral | None | None | None | None | I |
P/E | 0.9714 | likely_pathogenic | 0.9411 | pathogenic | -1.217 | Destabilizing | 0.938 | D | 0.656 | neutral | None | None | None | None | I |
P/F | 0.9844 | likely_pathogenic | 0.9652 | pathogenic | -0.966 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | I |
P/G | 0.8842 | likely_pathogenic | 0.7326 | pathogenic | -2.033 | Highly Destabilizing | 0.932 | D | 0.624 | neutral | None | None | None | None | I |
P/H | 0.9771 | likely_pathogenic | 0.9534 | pathogenic | -1.638 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.506200353 | None | None | I |
P/I | 0.8162 | likely_pathogenic | 0.7283 | pathogenic | -0.41 | Destabilizing | 0.679 | D | 0.489 | neutral | None | None | None | None | I |
P/K | 0.9915 | likely_pathogenic | 0.9824 | pathogenic | -1.166 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
P/L | 0.3965 | ambiguous | 0.3128 | benign | -0.41 | Destabilizing | 0.063 | N | 0.455 | neutral | N | 0.457053836 | None | None | I |
P/M | 0.8212 | likely_pathogenic | 0.7265 | pathogenic | -0.31 | Destabilizing | 0.989 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/N | 0.9794 | likely_pathogenic | 0.9505 | pathogenic | -1.139 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/Q | 0.9549 | likely_pathogenic | 0.9116 | pathogenic | -1.124 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | I |
P/R | 0.9769 | likely_pathogenic | 0.9555 | pathogenic | -0.896 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | N | 0.512276739 | None | None | I |
P/S | 0.8493 | likely_pathogenic | 0.6668 | pathogenic | -1.799 | Destabilizing | 0.878 | D | 0.59 | neutral | N | 0.478688349 | None | None | I |
P/T | 0.6496 | likely_pathogenic | 0.4693 | ambiguous | -1.55 | Destabilizing | 0.865 | D | 0.591 | neutral | N | 0.49662802 | None | None | I |
P/V | 0.6269 | likely_pathogenic | 0.4905 | ambiguous | -0.769 | Destabilizing | 0.711 | D | 0.547 | neutral | None | None | None | None | I |
P/W | 0.9968 | likely_pathogenic | 0.9916 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
P/Y | 0.9907 | likely_pathogenic | 0.978 | pathogenic | -0.944 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.