Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8463 | 25612;25613;25614 | chr2:178717347;178717346;178717345 | chr2:179582074;179582073;179582072 |
N2AB | 8146 | 24661;24662;24663 | chr2:178717347;178717346;178717345 | chr2:179582074;179582073;179582072 |
N2A | 7219 | 21880;21881;21882 | chr2:178717347;178717346;178717345 | chr2:179582074;179582073;179582072 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs767424522 | 0.112 | 0.018 | N | 0.419 | 0.161 | 0.279776271856 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs767424522 | 0.112 | 0.018 | N | 0.419 | 0.161 | 0.279776271856 | gnomAD-4.0.0 | 1.59345E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43406E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0992 | likely_benign | 0.1027 | benign | -0.559 | Destabilizing | 0.003 | N | 0.125 | neutral | N | 0.440570671 | None | None | N |
V/C | 0.7017 | likely_pathogenic | 0.6981 | pathogenic | -0.704 | Destabilizing | 0.984 | D | 0.529 | neutral | None | None | None | None | N |
V/D | 0.169 | likely_benign | 0.1587 | benign | -0.127 | Destabilizing | 0.479 | N | 0.535 | neutral | None | None | None | None | N |
V/E | 0.1351 | likely_benign | 0.1187 | benign | -0.206 | Destabilizing | None | N | 0.294 | neutral | N | 0.409266329 | None | None | N |
V/F | 0.1226 | likely_benign | 0.1302 | benign | -0.598 | Destabilizing | 0.829 | D | 0.565 | neutral | None | None | None | None | N |
V/G | 0.1207 | likely_benign | 0.1231 | benign | -0.731 | Destabilizing | 0.652 | D | 0.535 | neutral | N | 0.497560104 | None | None | N |
V/H | 0.3435 | ambiguous | 0.35 | ambiguous | -0.243 | Destabilizing | 0.875 | D | 0.563 | neutral | None | None | None | None | N |
V/I | 0.073 | likely_benign | 0.077 | benign | -0.242 | Destabilizing | 0.018 | N | 0.419 | neutral | N | 0.499349615 | None | None | N |
V/K | 0.1867 | likely_benign | 0.1712 | benign | -0.495 | Destabilizing | 0.245 | N | 0.526 | neutral | None | None | None | None | N |
V/L | 0.1103 | likely_benign | 0.1194 | benign | -0.242 | Destabilizing | None | N | 0.135 | neutral | N | 0.471605654 | None | None | N |
V/M | 0.1 | likely_benign | 0.1095 | benign | -0.421 | Destabilizing | 0.776 | D | 0.491 | neutral | None | None | None | None | N |
V/N | 0.1349 | likely_benign | 0.1491 | benign | -0.302 | Destabilizing | 0.252 | N | 0.57 | neutral | None | None | None | None | N |
V/P | 0.3896 | ambiguous | 0.3629 | ambiguous | -0.312 | Destabilizing | 0.406 | N | 0.564 | neutral | None | None | None | None | N |
V/Q | 0.166 | likely_benign | 0.1613 | benign | -0.478 | Destabilizing | 0.447 | N | 0.572 | neutral | None | None | None | None | N |
V/R | 0.18 | likely_benign | 0.177 | benign | -0.04 | Destabilizing | 0.829 | D | 0.569 | neutral | None | None | None | None | N |
V/S | 0.1065 | likely_benign | 0.1176 | benign | -0.717 | Destabilizing | 0.272 | N | 0.509 | neutral | None | None | None | None | N |
V/T | 0.1112 | likely_benign | 0.1168 | benign | -0.687 | Destabilizing | 0.231 | N | 0.381 | neutral | None | None | None | None | N |
V/W | 0.6966 | likely_pathogenic | 0.6938 | pathogenic | -0.701 | Destabilizing | 0.997 | D | 0.584 | neutral | None | None | None | None | N |
V/Y | 0.4008 | ambiguous | 0.4097 | ambiguous | -0.4 | Destabilizing | 0.908 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.