Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8465 | 25618;25619;25620 | chr2:178717341;178717340;178717339 | chr2:179582068;179582067;179582066 |
N2AB | 8148 | 24667;24668;24669 | chr2:178717341;178717340;178717339 | chr2:179582068;179582067;179582066 |
N2A | 7221 | 21886;21887;21888 | chr2:178717341;178717340;178717339 | chr2:179582068;179582067;179582066 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.928 | N | 0.416 | 0.55 | 0.857228785163 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1219 | likely_benign | 0.1163 | benign | -0.854 | Destabilizing | 0.184 | N | 0.291 | neutral | N | 0.500104551 | None | None | N |
V/C | 0.7832 | likely_pathogenic | 0.7017 | pathogenic | -0.823 | Destabilizing | 0.983 | D | 0.349 | neutral | None | None | None | None | N |
V/D | 0.3331 | likely_benign | 0.2793 | benign | 0.011 | Stabilizing | 0.862 | D | 0.444 | neutral | None | None | None | None | N |
V/E | 0.2177 | likely_benign | 0.1897 | benign | 0.002 | Stabilizing | 0.098 | N | 0.377 | neutral | N | 0.501882297 | None | None | N |
V/F | 0.1578 | likely_benign | 0.1436 | benign | -0.557 | Destabilizing | 0.824 | D | 0.384 | neutral | None | None | None | None | N |
V/G | 0.193 | likely_benign | 0.1665 | benign | -1.134 | Destabilizing | 0.928 | D | 0.416 | neutral | N | 0.51166844 | None | None | N |
V/H | 0.4784 | ambiguous | 0.405 | ambiguous | -0.577 | Destabilizing | 0.963 | D | 0.403 | neutral | None | None | None | None | N |
V/I | 0.0745 | likely_benign | 0.0738 | benign | -0.214 | Destabilizing | None | N | 0.093 | neutral | N | 0.469242926 | None | None | N |
V/K | 0.2439 | likely_benign | 0.2059 | benign | -0.626 | Destabilizing | 0.239 | N | 0.391 | neutral | None | None | None | None | N |
V/L | 0.1438 | likely_benign | 0.1312 | benign | -0.214 | Destabilizing | None | N | 0.087 | neutral | N | 0.493138506 | None | None | N |
V/M | 0.0981 | likely_benign | 0.0968 | benign | -0.375 | Destabilizing | 0.771 | D | 0.391 | neutral | None | None | None | None | N |
V/N | 0.2457 | likely_benign | 0.2156 | benign | -0.476 | Destabilizing | 0.399 | N | 0.439 | neutral | None | None | None | None | N |
V/P | 0.7332 | likely_pathogenic | 0.6714 | pathogenic | -0.39 | Destabilizing | 0.669 | D | 0.414 | neutral | None | None | None | None | N |
V/Q | 0.2332 | likely_benign | 0.202 | benign | -0.561 | Destabilizing | 0.039 | N | 0.341 | neutral | None | None | None | None | N |
V/R | 0.2158 | likely_benign | 0.1805 | benign | -0.266 | Destabilizing | 0.824 | D | 0.433 | neutral | None | None | None | None | N |
V/S | 0.173 | likely_benign | 0.1523 | benign | -1.071 | Destabilizing | 0.419 | N | 0.369 | neutral | None | None | None | None | N |
V/T | 0.1167 | likely_benign | 0.1115 | benign | -0.953 | Destabilizing | 0.226 | N | 0.251 | neutral | None | None | None | None | N |
V/W | 0.7515 | likely_pathogenic | 0.6733 | pathogenic | -0.696 | Destabilizing | 0.997 | D | 0.485 | neutral | None | None | None | None | N |
V/Y | 0.5341 | ambiguous | 0.4593 | ambiguous | -0.38 | Destabilizing | 0.905 | D | 0.389 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.