Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8469 | 25630;25631;25632 | chr2:178717329;178717328;178717327 | chr2:179582056;179582055;179582054 |
N2AB | 8152 | 24679;24680;24681 | chr2:178717329;178717328;178717327 | chr2:179582056;179582055;179582054 |
N2A | 7225 | 21898;21899;21900 | chr2:178717329;178717328;178717327 | chr2:179582056;179582055;179582054 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.893 | N | 0.255 | 0.193 | 0.227260227426 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1498 | likely_benign | 0.1444 | benign | -0.8 | Destabilizing | 0.096 | N | 0.134 | neutral | None | None | None | None | N |
L/C | 0.6983 | likely_pathogenic | 0.7093 | pathogenic | -0.644 | Destabilizing | 0.998 | D | 0.236 | neutral | None | None | None | None | N |
L/D | 0.7418 | likely_pathogenic | 0.7189 | pathogenic | -0.285 | Destabilizing | 0.983 | D | 0.347 | neutral | None | None | None | None | N |
L/E | 0.3981 | ambiguous | 0.3693 | ambiguous | -0.36 | Destabilizing | 0.855 | D | 0.347 | neutral | None | None | None | None | N |
L/F | 0.1326 | likely_benign | 0.1492 | benign | -0.691 | Destabilizing | 0.893 | D | 0.255 | neutral | N | 0.461794954 | None | None | N |
L/G | 0.4701 | ambiguous | 0.4622 | ambiguous | -1.0 | Destabilizing | 0.888 | D | 0.39 | neutral | None | None | None | None | N |
L/H | 0.2932 | likely_benign | 0.2995 | benign | -0.243 | Destabilizing | 0.018 | N | 0.408 | neutral | N | 0.473658238 | None | None | N |
L/I | 0.0746 | likely_benign | 0.0794 | benign | -0.384 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.417690158 | None | None | N |
L/K | 0.3714 | ambiguous | 0.3431 | ambiguous | -0.495 | Destabilizing | 0.322 | N | 0.344 | neutral | None | None | None | None | N |
L/M | 0.1067 | likely_benign | 0.107 | benign | -0.426 | Destabilizing | 0.77 | D | 0.264 | neutral | None | None | None | None | N |
L/N | 0.408 | ambiguous | 0.3924 | ambiguous | -0.263 | Destabilizing | 0.965 | D | 0.344 | neutral | None | None | None | None | N |
L/P | 0.203 | likely_benign | 0.1891 | benign | -0.489 | Destabilizing | 0.977 | D | 0.357 | neutral | N | 0.474871592 | None | None | N |
L/Q | 0.1563 | likely_benign | 0.1547 | benign | -0.482 | Destabilizing | 0.959 | D | 0.319 | neutral | None | None | None | None | N |
L/R | 0.2745 | likely_benign | 0.2683 | benign | 0.077 | Stabilizing | 0.944 | D | 0.33 | neutral | N | 0.462923802 | None | None | N |
L/S | 0.2096 | likely_benign | 0.2033 | benign | -0.746 | Destabilizing | 0.8 | D | 0.351 | neutral | None | None | None | None | N |
L/T | 0.1683 | likely_benign | 0.1682 | benign | -0.71 | Destabilizing | 0.031 | N | 0.185 | neutral | None | None | None | None | N |
L/V | 0.0751 | likely_benign | 0.0769 | benign | -0.489 | Destabilizing | 0.003 | N | 0.121 | neutral | N | 0.383998872 | None | None | N |
L/W | 0.2972 | likely_benign | 0.3147 | benign | -0.708 | Destabilizing | 0.999 | D | 0.359 | neutral | None | None | None | None | N |
L/Y | 0.4225 | ambiguous | 0.4462 | ambiguous | -0.468 | Destabilizing | 0.566 | D | 0.279 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.