Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8473 | 25642;25643;25644 | chr2:178717317;178717316;178717315 | chr2:179582044;179582043;179582042 |
N2AB | 8156 | 24691;24692;24693 | chr2:178717317;178717316;178717315 | chr2:179582044;179582043;179582042 |
N2A | 7229 | 21910;21911;21912 | chr2:178717317;178717316;178717315 | chr2:179582044;179582043;179582042 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs769092741 | -0.73 | 0.713 | N | 0.633 | 0.179 | 0.101711395817 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
G/S | rs769092741 | -0.73 | 0.713 | N | 0.633 | 0.179 | 0.101711395817 | gnomAD-4.0.0 | 7.95902E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.42979E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0883 | likely_benign | 0.0863 | benign | -0.325 | Destabilizing | 0.006 | N | 0.235 | neutral | N | 0.33372198 | None | None | N |
G/C | 0.3364 | likely_benign | 0.3014 | benign | -0.939 | Destabilizing | 0.999 | D | 0.74 | deleterious | N | 0.460806217 | None | None | N |
G/D | 0.8499 | likely_pathogenic | 0.8082 | pathogenic | 0.19 | Stabilizing | 0.987 | D | 0.747 | deleterious | N | 0.50434635 | None | None | N |
G/E | 0.8057 | likely_pathogenic | 0.7559 | pathogenic | 0.18 | Stabilizing | 0.992 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/F | 0.8819 | likely_pathogenic | 0.8406 | pathogenic | -0.556 | Destabilizing | 0.996 | D | 0.764 | deleterious | None | None | None | None | N |
G/H | 0.887 | likely_pathogenic | 0.8512 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/I | 0.4863 | ambiguous | 0.4375 | ambiguous | 0.169 | Stabilizing | 0.538 | D | 0.581 | neutral | None | None | None | None | N |
G/K | 0.908 | likely_pathogenic | 0.8735 | pathogenic | -0.634 | Destabilizing | 0.992 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/L | 0.6538 | likely_pathogenic | 0.6109 | pathogenic | 0.169 | Stabilizing | 0.886 | D | 0.613 | neutral | None | None | None | None | N |
G/M | 0.7245 | likely_pathogenic | 0.6792 | pathogenic | -0.196 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
G/N | 0.8 | likely_pathogenic | 0.7517 | pathogenic | -0.463 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | None | None | None | None | N |
G/P | 0.9816 | likely_pathogenic | 0.9748 | pathogenic | 0.048 | Stabilizing | 0.99 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/Q | 0.8044 | likely_pathogenic | 0.7617 | pathogenic | -0.445 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/R | 0.8045 | likely_pathogenic | 0.7597 | pathogenic | -0.619 | Destabilizing | 0.995 | D | 0.747 | deleterious | N | 0.503999634 | None | None | N |
G/S | 0.1377 | likely_benign | 0.1366 | benign | -0.921 | Destabilizing | 0.713 | D | 0.633 | neutral | N | 0.49322528 | None | None | N |
G/T | 0.2883 | likely_benign | 0.2663 | benign | -0.791 | Destabilizing | 0.974 | D | 0.675 | neutral | None | None | None | None | N |
G/V | 0.2911 | likely_benign | 0.2705 | benign | 0.048 | Stabilizing | 0.138 | N | 0.514 | neutral | N | 0.328505375 | None | None | N |
G/W | 0.8717 | likely_pathogenic | 0.8279 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/Y | 0.8501 | likely_pathogenic | 0.8009 | pathogenic | -0.426 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.