Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8476 | 25651;25652;25653 | chr2:178717308;178717307;178717306 | chr2:179582035;179582034;179582033 |
N2AB | 8159 | 24700;24701;24702 | chr2:178717308;178717307;178717306 | chr2:179582035;179582034;179582033 |
N2A | 7232 | 21919;21920;21921 | chr2:178717308;178717307;178717306 | chr2:179582035;179582034;179582033 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.478 | N | 0.455 | 0.479 | 0.393471546983 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3165 | likely_benign | 0.263 | benign | -0.436 | Destabilizing | 0.451 | N | 0.429 | neutral | None | None | None | None | I |
K/C | 0.7024 | likely_pathogenic | 0.6509 | pathogenic | -0.413 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
K/D | 0.5715 | likely_pathogenic | 0.4662 | ambiguous | -0.025 | Destabilizing | 0.003 | N | 0.281 | neutral | None | None | None | None | I |
K/E | 0.1496 | likely_benign | 0.1277 | benign | 0.066 | Stabilizing | 0.003 | N | 0.217 | neutral | N | 0.379444854 | None | None | I |
K/F | 0.7523 | likely_pathogenic | 0.6967 | pathogenic | -0.172 | Destabilizing | 0.945 | D | 0.607 | neutral | None | None | None | None | I |
K/G | 0.5313 | ambiguous | 0.457 | ambiguous | -0.789 | Destabilizing | 0.666 | D | 0.516 | neutral | None | None | None | None | I |
K/H | 0.2427 | likely_benign | 0.2171 | benign | -1.162 | Destabilizing | 0.947 | D | 0.557 | neutral | None | None | None | None | I |
K/I | 0.289 | likely_benign | 0.2444 | benign | 0.466 | Stabilizing | 0.239 | N | 0.612 | neutral | N | 0.492733074 | None | None | I |
K/L | 0.3125 | likely_benign | 0.283 | benign | 0.466 | Stabilizing | 0.106 | N | 0.573 | neutral | None | None | None | None | I |
K/M | 0.2219 | likely_benign | 0.1925 | benign | 0.354 | Stabilizing | 0.951 | D | 0.543 | neutral | None | None | None | None | I |
K/N | 0.3862 | ambiguous | 0.309 | benign | -0.276 | Destabilizing | 0.429 | N | 0.39 | neutral | N | 0.476107396 | None | None | I |
K/P | 0.8262 | likely_pathogenic | 0.7661 | pathogenic | 0.196 | Stabilizing | 0.934 | D | 0.549 | neutral | None | None | None | None | I |
K/Q | 0.0971 | likely_benign | 0.0906 | benign | -0.369 | Destabilizing | 0.154 | N | 0.439 | neutral | N | 0.444939127 | None | None | I |
K/R | 0.0802 | likely_benign | 0.083 | benign | -0.556 | Destabilizing | 0.217 | N | 0.4 | neutral | N | 0.462063451 | None | None | I |
K/S | 0.3127 | likely_benign | 0.2544 | benign | -0.913 | Destabilizing | 0.666 | D | 0.409 | neutral | None | None | None | None | I |
K/T | 0.1157 | likely_benign | 0.0955 | benign | -0.622 | Destabilizing | 0.478 | N | 0.455 | neutral | N | 0.446669924 | None | None | I |
K/V | 0.2803 | likely_benign | 0.2363 | benign | 0.196 | Stabilizing | 0.135 | N | 0.594 | neutral | None | None | None | None | I |
K/W | 0.7675 | likely_pathogenic | 0.7415 | pathogenic | -0.06 | Destabilizing | 0.996 | D | 0.644 | neutral | None | None | None | None | I |
K/Y | 0.5978 | likely_pathogenic | 0.5402 | ambiguous | 0.229 | Stabilizing | 0.668 | D | 0.6 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.