Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8478 | 25657;25658;25659 | chr2:178717302;178717301;178717300 | chr2:179582029;179582028;179582027 |
N2AB | 8161 | 24706;24707;24708 | chr2:178717302;178717301;178717300 | chr2:179582029;179582028;179582027 |
N2A | 7234 | 21925;21926;21927 | chr2:178717302;178717301;178717300 | chr2:179582029;179582028;179582027 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.993 | N | 0.531 | 0.23 | 0.218845423259 | gnomAD-4.0.0 | 6.84279E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99557E-07 | 0 | 0 |
H/R | rs747367057 | -0.865 | 0.949 | N | 0.502 | 0.247 | 0.250579442822 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/R | rs747367057 | -0.865 | 0.949 | N | 0.502 | 0.247 | 0.250579442822 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.857 | likely_pathogenic | 0.8424 | pathogenic | -0.864 | Destabilizing | 0.981 | D | 0.533 | neutral | None | None | None | None | N |
H/C | 0.6069 | likely_pathogenic | 0.5801 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
H/D | 0.8481 | likely_pathogenic | 0.8404 | pathogenic | -0.759 | Destabilizing | 0.983 | D | 0.545 | neutral | N | 0.487265752 | None | None | N |
H/E | 0.814 | likely_pathogenic | 0.7895 | pathogenic | -0.686 | Destabilizing | 0.981 | D | 0.491 | neutral | None | None | None | None | N |
H/F | 0.7445 | likely_pathogenic | 0.7413 | pathogenic | -0.09 | Destabilizing | 0.992 | D | 0.546 | neutral | None | None | None | None | N |
H/G | 0.8913 | likely_pathogenic | 0.8694 | pathogenic | -1.183 | Destabilizing | 0.996 | D | 0.544 | neutral | None | None | None | None | N |
H/I | 0.8527 | likely_pathogenic | 0.8584 | pathogenic | 0.002 | Stabilizing | 0.961 | D | 0.589 | neutral | None | None | None | None | N |
H/K | 0.6043 | likely_pathogenic | 0.5495 | ambiguous | -0.828 | Destabilizing | 0.396 | N | 0.326 | neutral | None | None | None | None | N |
H/L | 0.4908 | ambiguous | 0.5158 | ambiguous | 0.002 | Stabilizing | 0.949 | D | 0.571 | neutral | N | 0.510662687 | None | None | N |
H/M | 0.8868 | likely_pathogenic | 0.8901 | pathogenic | -0.082 | Destabilizing | 0.997 | D | 0.594 | neutral | None | None | None | None | N |
H/N | 0.4605 | ambiguous | 0.4783 | ambiguous | -0.773 | Destabilizing | 0.983 | D | 0.493 | neutral | N | 0.510969331 | None | None | N |
H/P | 0.9115 | likely_pathogenic | 0.9136 | pathogenic | -0.267 | Destabilizing | 0.998 | D | 0.589 | neutral | N | 0.513086917 | None | None | N |
H/Q | 0.5468 | ambiguous | 0.506 | ambiguous | -0.586 | Destabilizing | 0.993 | D | 0.531 | neutral | N | 0.491420778 | None | None | N |
H/R | 0.1999 | likely_benign | 0.1758 | benign | -1.062 | Destabilizing | 0.949 | D | 0.502 | neutral | N | 0.436991648 | None | None | N |
H/S | 0.7522 | likely_pathogenic | 0.7375 | pathogenic | -0.865 | Destabilizing | 0.992 | D | 0.491 | neutral | None | None | None | None | N |
H/T | 0.8259 | likely_pathogenic | 0.8075 | pathogenic | -0.702 | Destabilizing | 0.974 | D | 0.559 | neutral | None | None | None | None | N |
H/V | 0.7822 | likely_pathogenic | 0.7798 | pathogenic | -0.267 | Destabilizing | 0.406 | N | 0.503 | neutral | None | None | None | None | N |
H/W | 0.7543 | likely_pathogenic | 0.7359 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | N |
H/Y | 0.3401 | ambiguous | 0.3466 | ambiguous | 0.302 | Stabilizing | 0.409 | N | 0.311 | neutral | N | 0.497062315 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.