Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8479 | 25660;25661;25662 | chr2:178717299;178717298;178717297 | chr2:179582026;179582025;179582024 |
N2AB | 8162 | 24709;24710;24711 | chr2:178717299;178717298;178717297 | chr2:179582026;179582025;179582024 |
N2A | 7235 | 21928;21929;21930 | chr2:178717299;178717298;178717297 | chr2:179582026;179582025;179582024 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs990182590 | None | None | D | 0.387 | 0.149 | 0.303123707472 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 3.28947E-03 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs990182590 | None | None | D | 0.387 | 0.149 | 0.303123707472 | gnomAD-4.0.0 | 1.97148E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8196 | likely_pathogenic | 0.746 | pathogenic | -2.138 | Highly Destabilizing | 0.51 | D | 0.661 | neutral | N | 0.521832191 | None | None | N |
V/C | 0.9737 | likely_pathogenic | 0.9627 | pathogenic | -1.749 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
V/D | 0.9983 | likely_pathogenic | 0.9972 | pathogenic | -2.97 | Highly Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/E | 0.9934 | likely_pathogenic | 0.991 | pathogenic | -2.834 | Highly Destabilizing | 0.995 | D | 0.783 | deleterious | D | 0.585300943 | None | None | N |
V/F | 0.694 | likely_pathogenic | 0.6897 | pathogenic | -1.393 | Destabilizing | 0.187 | N | 0.495 | neutral | None | None | None | None | N |
V/G | 0.9504 | likely_pathogenic | 0.9131 | pathogenic | -2.598 | Highly Destabilizing | 0.944 | D | 0.783 | deleterious | D | 0.591105059 | None | None | N |
V/H | 0.9968 | likely_pathogenic | 0.9957 | pathogenic | -2.307 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/I | 0.0844 | likely_benign | 0.0866 | benign | -0.878 | Destabilizing | None | N | 0.387 | neutral | D | 0.536105423 | None | None | N |
V/K | 0.9947 | likely_pathogenic | 0.9931 | pathogenic | -1.865 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
V/L | 0.55 | ambiguous | 0.5283 | ambiguous | -0.878 | Destabilizing | 0.125 | N | 0.498 | neutral | D | 0.571644307 | None | None | N |
V/M | 0.5066 | ambiguous | 0.5488 | ambiguous | -0.798 | Destabilizing | 0.672 | D | 0.417 | neutral | None | None | None | None | N |
V/N | 0.9927 | likely_pathogenic | 0.9893 | pathogenic | -2.038 | Highly Destabilizing | 0.989 | D | 0.823 | deleterious | None | None | None | None | N |
V/P | 0.9958 | likely_pathogenic | 0.9925 | pathogenic | -1.271 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
V/Q | 0.9888 | likely_pathogenic | 0.9862 | pathogenic | -2.018 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/R | 0.9893 | likely_pathogenic | 0.9855 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/S | 0.9585 | likely_pathogenic | 0.9351 | pathogenic | -2.568 | Highly Destabilizing | 0.376 | N | 0.521 | neutral | None | None | None | None | N |
V/T | 0.8922 | likely_pathogenic | 0.8524 | pathogenic | -2.313 | Highly Destabilizing | 0.574 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/W | 0.9962 | likely_pathogenic | 0.9952 | pathogenic | -1.895 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/Y | 0.9804 | likely_pathogenic | 0.9762 | pathogenic | -1.582 | Destabilizing | 0.956 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.