Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8501 | 25726;25727;25728 | chr2:178717233;178717232;178717231 | chr2:179581960;179581959;179581958 |
N2AB | 8184 | 24775;24776;24777 | chr2:178717233;178717232;178717231 | chr2:179581960;179581959;179581958 |
N2A | 7257 | 21994;21995;21996 | chr2:178717233;178717232;178717231 | chr2:179581960;179581959;179581958 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs758559820 | 0.453 | 0.388 | N | 0.178 | 0.087 | 0.115124310173 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 1.65782E-04 |
N/K | rs758559820 | 0.453 | 0.388 | N | 0.178 | 0.087 | 0.115124310173 | gnomAD-4.0.0 | 5.47423E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.11557E-05 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6102 | likely_pathogenic | 0.6694 | pathogenic | -0.675 | Destabilizing | 0.252 | N | 0.311 | neutral | None | None | None | None | N |
N/C | 0.7428 | likely_pathogenic | 0.7721 | pathogenic | 0.155 | Stabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
N/D | 0.6202 | likely_pathogenic | 0.6458 | pathogenic | 0.311 | Stabilizing | 0.792 | D | 0.365 | neutral | N | 0.493571996 | None | None | N |
N/E | 0.9178 | likely_pathogenic | 0.9269 | pathogenic | 0.346 | Stabilizing | 0.894 | D | 0.309 | neutral | None | None | None | None | N |
N/F | 0.8524 | likely_pathogenic | 0.8785 | pathogenic | -0.711 | Destabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | N |
N/G | 0.6567 | likely_pathogenic | 0.7001 | pathogenic | -0.936 | Destabilizing | 0.946 | D | 0.309 | neutral | None | None | None | None | N |
N/H | 0.307 | likely_benign | 0.3294 | benign | -0.678 | Destabilizing | 0.992 | D | 0.404 | neutral | N | 0.499401891 | None | None | N |
N/I | 0.4883 | ambiguous | 0.562 | ambiguous | -0.047 | Destabilizing | 0.992 | D | 0.439 | neutral | N | 0.50827209 | None | None | N |
N/K | 0.8055 | likely_pathogenic | 0.8112 | pathogenic | 0.07 | Stabilizing | 0.388 | N | 0.178 | neutral | N | 0.477754395 | None | None | N |
N/L | 0.5379 | ambiguous | 0.592 | pathogenic | -0.047 | Destabilizing | 0.979 | D | 0.419 | neutral | None | None | None | None | N |
N/M | 0.7012 | likely_pathogenic | 0.7497 | pathogenic | 0.254 | Stabilizing | 0.999 | D | 0.387 | neutral | None | None | None | None | N |
N/P | 0.8096 | likely_pathogenic | 0.826 | pathogenic | -0.227 | Destabilizing | 0.973 | D | 0.395 | neutral | None | None | None | None | N |
N/Q | 0.7566 | likely_pathogenic | 0.7771 | pathogenic | -0.458 | Destabilizing | 0.679 | D | 0.227 | neutral | None | None | None | None | N |
N/R | 0.7894 | likely_pathogenic | 0.794 | pathogenic | 0.093 | Stabilizing | 0.969 | D | 0.373 | neutral | None | None | None | None | N |
N/S | 0.175 | likely_benign | 0.2024 | benign | -0.467 | Destabilizing | 0.059 | N | 0.106 | neutral | N | 0.487107384 | None | None | N |
N/T | 0.3752 | ambiguous | 0.4509 | ambiguous | -0.247 | Destabilizing | 0.747 | D | 0.313 | neutral | N | 0.510714962 | None | None | N |
N/V | 0.5705 | likely_pathogenic | 0.6352 | pathogenic | -0.227 | Destabilizing | 0.933 | D | 0.425 | neutral | None | None | None | None | N |
N/W | 0.9547 | likely_pathogenic | 0.9608 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | N |
N/Y | 0.433 | ambiguous | 0.4698 | ambiguous | -0.308 | Destabilizing | 0.999 | D | 0.391 | neutral | N | 0.464161584 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.