Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8505 | 25738;25739;25740 | chr2:178717221;178717220;178717219 | chr2:179581948;179581947;179581946 |
N2AB | 8188 | 24787;24788;24789 | chr2:178717221;178717220;178717219 | chr2:179581948;179581947;179581946 |
N2A | 7261 | 22006;22007;22008 | chr2:178717221;178717220;178717219 | chr2:179581948;179581947;179581946 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1361103429 | None | 0.07 | D | 0.309 | 0.191 | 0.163833314356 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1361103429 | None | 0.07 | D | 0.309 | 0.191 | 0.163833314356 | gnomAD-4.0.0 | 1.23949E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64366E-04 | 8.47683E-07 | 0 | 0 |
T/S | None | None | 0.005 | N | 0.105 | 0.141 | 0.101711395817 | gnomAD-4.0.0 | 6.84279E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1045 | likely_benign | 0.1091 | benign | -0.518 | Destabilizing | 0.07 | N | 0.309 | neutral | D | 0.531635392 | None | None | N |
T/C | 0.6053 | likely_pathogenic | 0.637 | pathogenic | -0.168 | Destabilizing | 0.998 | D | 0.421 | neutral | None | None | None | None | N |
T/D | 0.4071 | ambiguous | 0.4284 | ambiguous | -0.05 | Destabilizing | 0.84 | D | 0.396 | neutral | None | None | None | None | N |
T/E | 0.3586 | ambiguous | 0.3741 | ambiguous | -0.09 | Destabilizing | 0.833 | D | 0.363 | neutral | None | None | None | None | N |
T/F | 0.2308 | likely_benign | 0.2684 | benign | -0.73 | Destabilizing | 0.985 | D | 0.501 | neutral | None | None | None | None | N |
T/G | 0.3116 | likely_benign | 0.3249 | benign | -0.729 | Destabilizing | 0.862 | D | 0.401 | neutral | None | None | None | None | N |
T/H | 0.2426 | likely_benign | 0.26 | benign | -1.028 | Destabilizing | 0.998 | D | 0.483 | neutral | None | None | None | None | N |
T/I | 0.2066 | likely_benign | 0.2225 | benign | -0.062 | Destabilizing | 0.14 | N | 0.22 | neutral | N | 0.511646909 | None | None | N |
T/K | 0.2817 | likely_benign | 0.2862 | benign | -0.584 | Destabilizing | 0.874 | D | 0.353 | neutral | None | None | None | None | N |
T/L | 0.1204 | likely_benign | 0.1334 | benign | -0.062 | Destabilizing | 0.331 | N | 0.356 | neutral | None | None | None | None | N |
T/M | 0.0885 | likely_benign | 0.0944 | benign | 0.181 | Stabilizing | 0.59 | D | 0.352 | neutral | None | None | None | None | N |
T/N | 0.1178 | likely_benign | 0.1246 | benign | -0.327 | Destabilizing | 0.798 | D | 0.345 | neutral | N | 0.489557578 | None | None | N |
T/P | 0.6433 | likely_pathogenic | 0.6888 | pathogenic | -0.183 | Destabilizing | 0.889 | D | 0.425 | neutral | N | 0.511713984 | None | None | N |
T/Q | 0.2348 | likely_benign | 0.2456 | benign | -0.519 | Destabilizing | 0.92 | D | 0.435 | neutral | None | None | None | None | N |
T/R | 0.2403 | likely_benign | 0.2536 | benign | -0.316 | Destabilizing | 0.985 | D | 0.423 | neutral | None | None | None | None | N |
T/S | 0.1058 | likely_benign | 0.1105 | benign | -0.547 | Destabilizing | 0.005 | N | 0.105 | neutral | N | 0.422294341 | None | None | N |
T/V | 0.1721 | likely_benign | 0.1842 | benign | -0.183 | Destabilizing | 0.063 | N | 0.182 | neutral | None | None | None | None | N |
T/W | 0.6155 | likely_pathogenic | 0.665 | pathogenic | -0.72 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
T/Y | 0.2839 | likely_benign | 0.3133 | benign | -0.483 | Destabilizing | 0.992 | D | 0.502 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.