Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8506 | 25741;25742;25743 | chr2:178717218;178717217;178717216 | chr2:179581945;179581944;179581943 |
N2AB | 8189 | 24790;24791;24792 | chr2:178717218;178717217;178717216 | chr2:179581945;179581944;179581943 |
N2A | 7262 | 22009;22010;22011 | chr2:178717218;178717217;178717216 | chr2:179581945;179581944;179581943 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs748617903 | None | 0.026 | N | 0.217 | 0.118 | 0.386234084001 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | None | None | 0.452 | N | 0.498 | 0.092 | 0.243972157842 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1998 | likely_benign | 0.2445 | benign | -0.88 | Destabilizing | 0.966 | D | 0.525 | neutral | None | None | None | None | I |
L/C | 0.5298 | ambiguous | 0.5978 | pathogenic | -0.636 | Destabilizing | 0.17 | N | 0.369 | neutral | None | None | None | None | I |
L/D | 0.6985 | likely_pathogenic | 0.7452 | pathogenic | -0.352 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | I |
L/E | 0.3633 | ambiguous | 0.4242 | ambiguous | -0.438 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/F | 0.0828 | likely_benign | 0.0957 | benign | -0.875 | Destabilizing | 0.026 | N | 0.217 | neutral | N | 0.386410899 | None | None | I |
L/G | 0.5475 | ambiguous | 0.6235 | pathogenic | -1.077 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/H | 0.175 | likely_benign | 0.2072 | benign | -0.425 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
L/I | 0.081 | likely_benign | 0.0858 | benign | -0.475 | Destabilizing | 0.294 | N | 0.475 | neutral | None | None | None | None | I |
L/K | 0.3013 | likely_benign | 0.3589 | ambiguous | -0.469 | Destabilizing | 0.947 | D | 0.7 | prob.neutral | None | None | None | None | I |
L/M | 0.0889 | likely_benign | 0.0972 | benign | -0.34 | Destabilizing | 0.948 | D | 0.561 | neutral | N | 0.499522974 | None | None | I |
L/N | 0.3932 | ambiguous | 0.4365 | ambiguous | -0.235 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | I |
L/P | 0.641 | likely_pathogenic | 0.7101 | pathogenic | -0.576 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | I |
L/Q | 0.1476 | likely_benign | 0.1756 | benign | -0.484 | Destabilizing | 0.996 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/R | 0.1908 | likely_benign | 0.2264 | benign | 0.103 | Stabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/S | 0.2496 | likely_benign | 0.305 | benign | -0.725 | Destabilizing | 0.993 | D | 0.643 | neutral | N | 0.452153101 | None | None | I |
L/T | 0.1767 | likely_benign | 0.2073 | benign | -0.699 | Destabilizing | 0.945 | D | 0.563 | neutral | None | None | None | None | I |
L/V | 0.0723 | likely_benign | 0.0784 | benign | -0.576 | Destabilizing | 0.452 | N | 0.498 | neutral | N | 0.439799879 | None | None | I |
L/W | 0.169 | likely_benign | 0.1986 | benign | -0.893 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.515588504 | None | None | I |
L/Y | 0.2394 | likely_benign | 0.2732 | benign | -0.632 | Destabilizing | 0.698 | D | 0.555 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.