Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8507 | 25744;25745;25746 | chr2:178717215;178717214;178717213 | chr2:179581942;179581941;179581940 |
N2AB | 8190 | 24793;24794;24795 | chr2:178717215;178717214;178717213 | chr2:179581942;179581941;179581940 |
N2A | 7263 | 22012;22013;22014 | chr2:178717215;178717214;178717213 | chr2:179581942;179581941;179581940 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.222 | 0.136 | 0.517322629239 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1103 | likely_benign | 0.1144 | benign | -0.445 | Destabilizing | 0.009 | N | 0.278 | neutral | N | 0.482668009 | None | None | N |
V/C | 0.7809 | likely_pathogenic | 0.809 | pathogenic | -0.538 | Destabilizing | 0.826 | D | 0.316 | neutral | None | None | None | None | N |
V/D | 0.2087 | likely_benign | 0.2156 | benign | -0.455 | Destabilizing | 0.067 | N | 0.381 | neutral | None | None | None | None | N |
V/E | 0.158 | likely_benign | 0.1639 | benign | -0.586 | Destabilizing | None | N | 0.185 | neutral | N | 0.465503614 | None | None | N |
V/F | 0.1392 | likely_benign | 0.1479 | benign | -0.76 | Destabilizing | 0.274 | N | 0.371 | neutral | None | None | None | None | N |
V/G | 0.1631 | likely_benign | 0.1715 | benign | -0.558 | Destabilizing | 0.127 | N | 0.38 | neutral | N | 0.517743375 | None | None | N |
V/H | 0.3842 | ambiguous | 0.3962 | ambiguous | -0.181 | Destabilizing | 0.625 | D | 0.402 | neutral | None | None | None | None | N |
V/I | 0.0787 | likely_benign | 0.0799 | benign | -0.301 | Destabilizing | None | N | 0.222 | neutral | N | 0.506603662 | None | None | N |
V/K | 0.2487 | likely_benign | 0.2667 | benign | -0.441 | Destabilizing | 0.001 | N | 0.248 | neutral | None | None | None | None | N |
V/L | 0.1436 | likely_benign | 0.1485 | benign | -0.301 | Destabilizing | None | N | 0.246 | neutral | N | 0.465045041 | None | None | N |
V/M | 0.1225 | likely_benign | 0.1282 | benign | -0.274 | Destabilizing | 0.007 | N | 0.223 | neutral | None | None | None | None | N |
V/N | 0.1985 | likely_benign | 0.2051 | benign | -0.152 | Destabilizing | 0.026 | N | 0.469 | neutral | None | None | None | None | N |
V/P | 0.6503 | likely_pathogenic | 0.6994 | pathogenic | -0.314 | Destabilizing | 0.051 | N | 0.428 | neutral | None | None | None | None | N |
V/Q | 0.1947 | likely_benign | 0.2064 | benign | -0.436 | Destabilizing | 0.035 | N | 0.439 | neutral | None | None | None | None | N |
V/R | 0.2175 | likely_benign | 0.2359 | benign | 0.117 | Stabilizing | 0.051 | N | 0.433 | neutral | None | None | None | None | N |
V/S | 0.1346 | likely_benign | 0.1371 | benign | -0.461 | Destabilizing | 0.028 | N | 0.327 | neutral | None | None | None | None | N |
V/T | 0.1163 | likely_benign | 0.1182 | benign | -0.498 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
V/W | 0.6462 | likely_pathogenic | 0.6795 | pathogenic | -0.84 | Destabilizing | 0.959 | D | 0.435 | neutral | None | None | None | None | N |
V/Y | 0.4773 | ambiguous | 0.5045 | ambiguous | -0.538 | Destabilizing | 0.433 | N | 0.345 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.