Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8508 | 25747;25748;25749 | chr2:178717212;178717211;178717210 | chr2:179581939;179581938;179581937 |
N2AB | 8191 | 24796;24797;24798 | chr2:178717212;178717211;178717210 | chr2:179581939;179581938;179581937 |
N2A | 7264 | 22015;22016;22017 | chr2:178717212;178717211;178717210 | chr2:179581939;179581938;179581937 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.186 | 0.048 | 0.0762999501168 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/G | rs2154298886 | None | 0.8 | N | 0.447 | 0.214 | 0.238096912614 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs2154298886 | None | 0.8 | N | 0.447 | 0.214 | 0.238096912614 | gnomAD-4.0.0 | 2.5623E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.42483E-05 | None | 0 | 0 | 2.39373E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1715 | likely_benign | 0.194 | benign | -0.183 | Destabilizing | 0.546 | D | 0.431 | neutral | N | 0.478911975 | None | None | I |
E/C | 0.8739 | likely_pathogenic | 0.8956 | pathogenic | -0.143 | Destabilizing | 0.992 | D | 0.584 | neutral | None | None | None | None | I |
E/D | 0.0976 | likely_benign | 0.0972 | benign | -0.184 | Destabilizing | None | N | 0.186 | neutral | N | 0.397178813 | None | None | I |
E/F | 0.8658 | likely_pathogenic | 0.8968 | pathogenic | -0.202 | Destabilizing | 0.985 | D | 0.499 | neutral | None | None | None | None | I |
E/G | 0.0959 | likely_benign | 0.1048 | benign | -0.325 | Destabilizing | 0.8 | D | 0.447 | neutral | N | 0.432923396 | None | None | I |
E/H | 0.4633 | ambiguous | 0.4982 | ambiguous | 0.298 | Stabilizing | 0.937 | D | 0.388 | neutral | None | None | None | None | I |
E/I | 0.7146 | likely_pathogenic | 0.7759 | pathogenic | 0.138 | Stabilizing | 0.908 | D | 0.502 | neutral | None | None | None | None | I |
E/K | 0.1649 | likely_benign | 0.191 | benign | 0.291 | Stabilizing | 0.69 | D | 0.411 | neutral | N | 0.46392388 | None | None | I |
E/L | 0.5831 | likely_pathogenic | 0.6581 | pathogenic | 0.138 | Stabilizing | 0.908 | D | 0.49 | neutral | None | None | None | None | I |
E/M | 0.6515 | likely_pathogenic | 0.7099 | pathogenic | 0.018 | Stabilizing | 0.953 | D | 0.491 | neutral | None | None | None | None | I |
E/N | 0.1883 | likely_benign | 0.1944 | benign | 0.142 | Stabilizing | 0.009 | N | 0.221 | neutral | None | None | None | None | I |
E/P | 0.6418 | likely_pathogenic | 0.6936 | pathogenic | 0.05 | Stabilizing | 0.593 | D | 0.389 | neutral | None | None | None | None | I |
E/Q | 0.1386 | likely_benign | 0.1541 | benign | 0.153 | Stabilizing | 0.919 | D | 0.372 | neutral | N | 0.479258692 | None | None | I |
E/R | 0.2645 | likely_benign | 0.3022 | benign | 0.547 | Stabilizing | 0.954 | D | 0.378 | neutral | None | None | None | None | I |
E/S | 0.1891 | likely_benign | 0.2062 | benign | -0.051 | Destabilizing | 0.614 | D | 0.397 | neutral | None | None | None | None | I |
E/T | 0.3512 | ambiguous | 0.4006 | ambiguous | 0.062 | Stabilizing | 0.687 | D | 0.399 | neutral | None | None | None | None | I |
E/V | 0.4972 | ambiguous | 0.5641 | pathogenic | 0.05 | Stabilizing | 0.84 | D | 0.437 | neutral | N | 0.454819968 | None | None | I |
E/W | 0.9083 | likely_pathogenic | 0.9282 | pathogenic | -0.129 | Destabilizing | 0.998 | D | 0.622 | neutral | None | None | None | None | I |
E/Y | 0.687 | likely_pathogenic | 0.7277 | pathogenic | 0.021 | Stabilizing | 0.994 | D | 0.456 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.