Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8509 | 25750;25751;25752 | chr2:178717209;178717208;178717207 | chr2:179581936;179581935;179581934 |
N2AB | 8192 | 24799;24800;24801 | chr2:178717209;178717208;178717207 | chr2:179581936;179581935;179581934 |
N2A | 7265 | 22018;22019;22020 | chr2:178717209;178717208;178717207 | chr2:179581936;179581935;179581934 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.198 | N | 0.325 | 0.243 | 0.253726318573 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5769 | likely_pathogenic | 0.6049 | pathogenic | -0.625 | Destabilizing | 0.986 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/C | 0.7494 | likely_pathogenic | 0.794 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/D | 0.2001 | likely_benign | 0.2068 | benign | -0.376 | Destabilizing | 0.198 | N | 0.325 | neutral | N | 0.511662765 | None | None | N |
N/E | 0.6104 | likely_pathogenic | 0.6272 | pathogenic | -0.303 | Destabilizing | 0.994 | D | 0.551 | neutral | None | None | None | None | N |
N/F | 0.8785 | likely_pathogenic | 0.8969 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/G | 0.4175 | ambiguous | 0.4268 | ambiguous | -0.953 | Destabilizing | 0.999 | D | 0.516 | neutral | None | None | None | None | N |
N/H | 0.2219 | likely_benign | 0.2344 | benign | -0.904 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | D | 0.524182699 | None | None | N |
N/I | 0.787 | likely_pathogenic | 0.8169 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.755 | deleterious | N | 0.513079883 | None | None | N |
N/K | 0.4971 | ambiguous | 0.5259 | ambiguous | -0.283 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.48889556 | None | None | N |
N/L | 0.7264 | likely_pathogenic | 0.7625 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
N/M | 0.694 | likely_pathogenic | 0.7275 | pathogenic | 0.619 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
N/P | 0.9412 | likely_pathogenic | 0.9455 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/Q | 0.5249 | ambiguous | 0.5483 | ambiguous | -0.723 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/R | 0.6004 | likely_pathogenic | 0.6307 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
N/S | 0.1905 | likely_benign | 0.1954 | benign | -0.704 | Destabilizing | 0.988 | D | 0.521 | neutral | D | 0.533115472 | None | None | N |
N/T | 0.3944 | ambiguous | 0.4142 | ambiguous | -0.451 | Destabilizing | 0.996 | D | 0.612 | neutral | N | 0.48918873 | None | None | N |
N/V | 0.7777 | likely_pathogenic | 0.8088 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
N/W | 0.9384 | likely_pathogenic | 0.9492 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/Y | 0.3311 | likely_benign | 0.3678 | ambiguous | -0.094 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.519409759 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.