Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8513 | 25762;25763;25764 | chr2:178717197;178717196;178717195 | chr2:179581924;179581923;179581922 |
N2AB | 8196 | 24811;24812;24813 | chr2:178717197;178717196;178717195 | chr2:179581924;179581923;179581922 |
N2A | 7269 | 22030;22031;22032 | chr2:178717197;178717196;178717195 | chr2:179581924;179581923;179581922 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.909 | 0.862 | 0.922627982565 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9271 | likely_pathogenic | 0.9432 | pathogenic | -2.106 | Highly Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
L/C | 0.9259 | likely_pathogenic | 0.9442 | pathogenic | -1.597 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -2.906 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/E | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -2.583 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/F | 0.6106 | likely_pathogenic | 0.7058 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/G | 0.9902 | likely_pathogenic | 0.9929 | pathogenic | -2.709 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/H | 0.9941 | likely_pathogenic | 0.9955 | pathogenic | -2.717 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/I | 0.2227 | likely_benign | 0.2838 | benign | -0.3 | Destabilizing | 0.994 | D | 0.651 | neutral | None | None | None | None | N |
L/K | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -1.541 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/M | 0.329 | likely_benign | 0.3832 | ambiguous | -0.627 | Destabilizing | 0.988 | D | 0.589 | neutral | D | 0.526978446 | None | None | N |
L/N | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -2.25 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.5833059 | None | None | N |
L/Q | 0.9891 | likely_pathogenic | 0.9916 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.5833059 | None | None | N |
L/R | 0.9922 | likely_pathogenic | 0.9936 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.5833059 | None | None | N |
L/S | 0.9939 | likely_pathogenic | 0.9955 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/T | 0.9769 | likely_pathogenic | 0.9833 | pathogenic | -2.276 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
L/V | 0.2143 | likely_benign | 0.2612 | benign | -0.892 | Destabilizing | 0.994 | D | 0.679 | prob.neutral | D | 0.536929173 | None | None | N |
L/W | 0.9797 | likely_pathogenic | 0.9873 | pathogenic | -1.745 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/Y | 0.9769 | likely_pathogenic | 0.9852 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.