Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8525 | 25798;25799;25800 | chr2:178717161;178717160;178717159 | chr2:179581888;179581887;179581886 |
N2AB | 8208 | 24847;24848;24849 | chr2:178717161;178717160;178717159 | chr2:179581888;179581887;179581886 |
N2A | 7281 | 22066;22067;22068 | chr2:178717161;178717160;178717159 | chr2:179581888;179581887;179581886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | None | N | 0.239 | 0.301 | 0.270447802918 | gnomAD-4.0.0 | 2.05295E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
Q/P | rs2077609752 | None | 0.224 | N | 0.461 | 0.29 | 0.233785782151 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/P | rs2077609752 | None | 0.224 | N | 0.461 | 0.29 | 0.233785782151 | gnomAD-4.0.0 | 6.57013E-06 | None | None | None | None | N | None | 2.41103E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2091 | likely_benign | 0.2036 | benign | -0.488 | Destabilizing | 0.024 | N | 0.271 | neutral | None | None | None | None | N |
Q/C | 0.5726 | likely_pathogenic | 0.5761 | pathogenic | 0.058 | Stabilizing | 0.803 | D | 0.526 | neutral | None | None | None | None | N |
Q/D | 0.3366 | likely_benign | 0.3314 | benign | -0.863 | Destabilizing | 0.037 | N | 0.31 | neutral | None | None | None | None | N |
Q/E | 0.0879 | likely_benign | 0.087 | benign | -0.816 | Destabilizing | None | N | 0.121 | neutral | N | 0.40807425 | None | None | N |
Q/F | 0.4713 | ambiguous | 0.4672 | ambiguous | -0.602 | Destabilizing | 0.259 | N | 0.599 | neutral | None | None | None | None | N |
Q/G | 0.3006 | likely_benign | 0.2954 | benign | -0.773 | Destabilizing | 0.001 | N | 0.229 | neutral | None | None | None | None | N |
Q/H | 0.1502 | likely_benign | 0.1518 | benign | -0.96 | Destabilizing | 0.572 | D | 0.407 | neutral | N | 0.472645804 | None | None | N |
Q/I | 0.1988 | likely_benign | 0.1959 | benign | 0.209 | Stabilizing | 0.049 | N | 0.438 | neutral | None | None | None | None | N |
Q/K | 0.0916 | likely_benign | 0.0913 | benign | -0.137 | Destabilizing | None | N | 0.123 | neutral | N | 0.421483478 | None | None | N |
Q/L | 0.0832 | likely_benign | 0.0808 | benign | 0.209 | Stabilizing | None | N | 0.239 | neutral | N | 0.419774111 | None | None | N |
Q/M | 0.2579 | likely_benign | 0.2449 | benign | 0.841 | Stabilizing | 0.467 | N | 0.421 | neutral | None | None | None | None | N |
Q/N | 0.2233 | likely_benign | 0.2135 | benign | -0.664 | Destabilizing | 0.072 | N | 0.358 | neutral | None | None | None | None | N |
Q/P | 0.1826 | likely_benign | 0.1833 | benign | 0.007 | Stabilizing | 0.224 | N | 0.461 | neutral | N | 0.498002821 | None | None | N |
Q/R | 0.1002 | likely_benign | 0.0988 | benign | -0.07 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.43497285 | None | None | N |
Q/S | 0.2304 | likely_benign | 0.2189 | benign | -0.68 | Destabilizing | 0.053 | N | 0.253 | neutral | None | None | None | None | N |
Q/T | 0.1652 | likely_benign | 0.1605 | benign | -0.454 | Destabilizing | 0.01 | N | 0.345 | neutral | None | None | None | None | N |
Q/V | 0.1529 | likely_benign | 0.1471 | benign | 0.007 | Stabilizing | None | N | 0.238 | neutral | None | None | None | None | N |
Q/W | 0.3629 | ambiguous | 0.3662 | ambiguous | -0.539 | Destabilizing | 0.987 | D | 0.523 | neutral | None | None | None | None | N |
Q/Y | 0.3196 | likely_benign | 0.3138 | benign | -0.235 | Destabilizing | 0.414 | N | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.