Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8532 | 25819;25820;25821 | chr2:178717140;178717139;178717138 | chr2:179581867;179581866;179581865 |
N2AB | 8215 | 24868;24869;24870 | chr2:178717140;178717139;178717138 | chr2:179581867;179581866;179581865 |
N2A | 7288 | 22087;22088;22089 | chr2:178717140;178717139;178717138 | chr2:179581867;179581866;179581865 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs368106359 | -0.945 | 0.999 | N | 0.592 | 0.616 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 1.66334E-04 |
N/S | rs368106359 | -0.945 | 0.999 | N | 0.592 | 0.616 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs368106359 | -0.945 | 0.999 | N | 0.592 | 0.616 | None | gnomAD-4.0.0 | 8.05777E-06 | None | None | None | None | I | None | 0 | 1.66722E-05 | None | 0 | 0 | None | 0 | 0 | 1.01734E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9675 | likely_pathogenic | 0.9659 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
N/C | 0.9241 | likely_pathogenic | 0.9276 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
N/D | 0.9114 | likely_pathogenic | 0.924 | pathogenic | -1.065 | Destabilizing | 0.999 | D | 0.629 | neutral | D | 0.558513153 | None | None | I |
N/E | 0.9955 | likely_pathogenic | 0.9953 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
N/F | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/G | 0.8961 | likely_pathogenic | 0.9021 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
N/H | 0.9052 | likely_pathogenic | 0.9058 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.5597806 | None | None | I |
N/I | 0.9874 | likely_pathogenic | 0.9874 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.56003409 | None | None | I |
N/K | 0.9959 | likely_pathogenic | 0.9958 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.559273621 | None | None | I |
N/L | 0.9742 | likely_pathogenic | 0.9748 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
N/M | 0.9887 | likely_pathogenic | 0.9889 | pathogenic | 0.539 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
N/P | 0.99 | likely_pathogenic | 0.9889 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/Q | 0.9935 | likely_pathogenic | 0.9929 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
N/R | 0.9917 | likely_pathogenic | 0.9913 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
N/S | 0.3379 | likely_benign | 0.3306 | benign | -0.906 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.499071826 | None | None | I |
N/T | 0.7963 | likely_pathogenic | 0.7951 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | D | 0.522722716 | None | None | I |
N/V | 0.9745 | likely_pathogenic | 0.9741 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
N/W | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
N/Y | 0.9857 | likely_pathogenic | 0.9867 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.5597806 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.