Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8537 | 25834;25835;25836 | chr2:178717125;178717124;178717123 | chr2:179581852;179581851;179581850 |
N2AB | 8220 | 24883;24884;24885 | chr2:178717125;178717124;178717123 | chr2:179581852;179581851;179581850 |
N2A | 7293 | 22102;22103;22104 | chr2:178717125;178717124;178717123 | chr2:179581852;179581851;179581850 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.063 | N | 0.345 | 0.072 | 0.333154297509 | gnomAD-4.0.0 | 1.36895E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.3151E-05 |
D/N | rs2077605401 | None | 0.993 | N | 0.581 | 0.337 | 0.513112959101 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1985 | likely_benign | 0.2052 | benign | -0.533 | Destabilizing | 0.978 | D | 0.609 | neutral | N | 0.441224032 | None | None | I |
D/C | 0.8675 | likely_pathogenic | 0.8882 | pathogenic | -0.237 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
D/E | 0.3536 | ambiguous | 0.3502 | ambiguous | -0.44 | Destabilizing | 0.063 | N | 0.345 | neutral | N | 0.491460851 | None | None | I |
D/F | 0.7796 | likely_pathogenic | 0.79 | pathogenic | 0.153 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
D/G | 0.2754 | likely_benign | 0.293 | benign | -0.906 | Destabilizing | 0.985 | D | 0.618 | neutral | N | 0.505749276 | None | None | I |
D/H | 0.5817 | likely_pathogenic | 0.6206 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.62 | neutral | N | 0.505749276 | None | None | I |
D/I | 0.5868 | likely_pathogenic | 0.6115 | pathogenic | 0.462 | Stabilizing | 0.997 | D | 0.675 | neutral | None | None | None | None | I |
D/K | 0.7434 | likely_pathogenic | 0.7566 | pathogenic | -0.196 | Destabilizing | 0.995 | D | 0.61 | neutral | None | None | None | None | I |
D/L | 0.6624 | likely_pathogenic | 0.681 | pathogenic | 0.462 | Stabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | I |
D/M | 0.8242 | likely_pathogenic | 0.8406 | pathogenic | 0.783 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
D/N | 0.177 | likely_benign | 0.2078 | benign | -0.773 | Destabilizing | 0.993 | D | 0.581 | neutral | N | 0.493379012 | None | None | I |
D/P | 0.9822 | likely_pathogenic | 0.9854 | pathogenic | 0.155 | Stabilizing | 0.989 | D | 0.653 | neutral | None | None | None | None | I |
D/Q | 0.6137 | likely_pathogenic | 0.6276 | pathogenic | -0.612 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | I |
D/R | 0.7731 | likely_pathogenic | 0.7865 | pathogenic | 0.036 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/S | 0.1956 | likely_benign | 0.2168 | benign | -1.038 | Destabilizing | 0.967 | D | 0.531 | neutral | None | None | None | None | I |
D/T | 0.3919 | ambiguous | 0.4011 | ambiguous | -0.72 | Destabilizing | 0.448 | N | 0.355 | neutral | None | None | None | None | I |
D/V | 0.315 | likely_benign | 0.3273 | benign | 0.155 | Stabilizing | 0.463 | N | 0.523 | neutral | N | 0.470122786 | None | None | I |
D/W | 0.9746 | likely_pathogenic | 0.9779 | pathogenic | 0.434 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/Y | 0.4106 | ambiguous | 0.4296 | ambiguous | 0.438 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.5097882 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.