Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8541 | 25846;25847;25848 | chr2:178717113;178717112;178717111 | chr2:179581840;179581839;179581838 |
N2AB | 8224 | 24895;24896;24897 | chr2:178717113;178717112;178717111 | chr2:179581840;179581839;179581838 |
N2A | 7297 | 22114;22115;22116 | chr2:178717113;178717112;178717111 | chr2:179581840;179581839;179581838 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.511 | N | 0.39 | 0.253 | 0.472582640538 | gnomAD-4.0.0 | 1.59535E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7202 | likely_pathogenic | 0.7425 | pathogenic | -1.269 | Destabilizing | 0.349 | N | 0.427 | neutral | None | None | None | None | N |
A/D | 0.9368 | likely_pathogenic | 0.95 | pathogenic | -1.398 | Destabilizing | 0.987 | D | 0.786 | deleterious | D | 0.556840172 | None | None | N |
A/E | 0.9318 | likely_pathogenic | 0.9443 | pathogenic | -1.339 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
A/F | 0.8314 | likely_pathogenic | 0.8707 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
A/G | 0.2166 | likely_benign | 0.2393 | benign | -1.369 | Destabilizing | 0.679 | D | 0.607 | neutral | N | 0.495525968 | None | None | N |
A/H | 0.9563 | likely_pathogenic | 0.9658 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
A/I | 0.6602 | likely_pathogenic | 0.7085 | pathogenic | -0.146 | Destabilizing | 0.993 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/K | 0.9805 | likely_pathogenic | 0.9854 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/L | 0.5983 | likely_pathogenic | 0.6499 | pathogenic | -0.146 | Destabilizing | 0.993 | D | 0.662 | neutral | None | None | None | None | N |
A/M | 0.6249 | likely_pathogenic | 0.6673 | pathogenic | -0.292 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
A/N | 0.8913 | likely_pathogenic | 0.9103 | pathogenic | -1.076 | Destabilizing | 0.922 | D | 0.782 | deleterious | None | None | None | None | N |
A/P | 0.9831 | likely_pathogenic | 0.9866 | pathogenic | -0.39 | Destabilizing | 0.994 | D | 0.769 | deleterious | D | 0.538900501 | None | None | N |
A/Q | 0.9093 | likely_pathogenic | 0.927 | pathogenic | -1.106 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
A/R | 0.9468 | likely_pathogenic | 0.9585 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
A/S | 0.1398 | likely_benign | 0.1442 | benign | -1.56 | Destabilizing | 0.026 | N | 0.173 | neutral | N | 0.50691588 | None | None | N |
A/T | 0.1812 | likely_benign | 0.1885 | benign | -1.378 | Destabilizing | 0.877 | D | 0.611 | neutral | N | 0.49318211 | None | None | N |
A/V | 0.3294 | likely_benign | 0.3622 | ambiguous | -0.39 | Destabilizing | 0.511 | D | 0.39 | neutral | N | 0.50333407 | None | None | N |
A/W | 0.984 | likely_pathogenic | 0.9889 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/Y | 0.946 | likely_pathogenic | 0.96 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.