Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8543 | 25852;25853;25854 | chr2:178717107;178717106;178717105 | chr2:179581834;179581833;179581832 |
N2AB | 8226 | 24901;24902;24903 | chr2:178717107;178717106;178717105 | chr2:179581834;179581833;179581832 |
N2A | 7299 | 22120;22121;22122 | chr2:178717107;178717106;178717105 | chr2:179581834;179581833;179581832 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.863 | 0.765 | 0.887417416464 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8552 | likely_pathogenic | 0.8639 | pathogenic | -2.701 | Highly Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/C | 0.9391 | likely_pathogenic | 0.9408 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -3.064 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/E | 0.9898 | likely_pathogenic | 0.991 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.5402 | ambiguous | 0.5951 | pathogenic | -1.658 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
L/G | 0.9822 | likely_pathogenic | 0.984 | pathogenic | -3.312 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9783 | likely_pathogenic | 0.9826 | pathogenic | -2.871 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
L/I | 0.199 | likely_benign | 0.1926 | benign | -0.901 | Destabilizing | 0.18 | N | 0.346 | neutral | None | None | None | None | N |
L/K | 0.9863 | likely_pathogenic | 0.9881 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.2913 | likely_benign | 0.3189 | benign | -0.972 | Destabilizing | 0.997 | D | 0.732 | prob.delet. | D | 0.52459341 | None | None | N |
L/N | 0.9934 | likely_pathogenic | 0.9942 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/P | 0.9903 | likely_pathogenic | 0.9911 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.548231074 | None | None | N |
L/Q | 0.9599 | likely_pathogenic | 0.9686 | pathogenic | -2.32 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.548231074 | None | None | N |
L/R | 0.9671 | likely_pathogenic | 0.9717 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.536874768 | None | None | N |
L/S | 0.9821 | likely_pathogenic | 0.9849 | pathogenic | -3.301 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/T | 0.9056 | likely_pathogenic | 0.9132 | pathogenic | -2.845 | Highly Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
L/V | 0.2076 | likely_benign | 0.1996 | benign | -1.486 | Destabilizing | 0.179 | N | 0.337 | neutral | N | 0.477136398 | None | None | N |
L/W | 0.9055 | likely_pathogenic | 0.9282 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/Y | 0.9345 | likely_pathogenic | 0.9503 | pathogenic | -1.792 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.