Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8544 | 25855;25856;25857 | chr2:178717104;178717103;178717102 | chr2:179581831;179581830;179581829 |
N2AB | 8227 | 24904;24905;24906 | chr2:178717104;178717103;178717102 | chr2:179581831;179581830;179581829 |
N2A | 7300 | 22123;22124;22125 | chr2:178717104;178717103;178717102 | chr2:179581831;179581830;179581829 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs2077603060 | None | 0.009 | N | 0.189 | 0.202 | 0.178374595973 | gnomAD-4.0.0 | 1.3717E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80309E-06 | 0 | 0 |
G/D | None | None | 0.861 | N | 0.631 | 0.257 | 0.312306559268 | gnomAD-4.0.0 | 2.7434E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60617E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0726 | likely_benign | 0.0707 | benign | -0.648 | Destabilizing | 0.009 | N | 0.189 | neutral | N | 0.446707209 | None | None | N |
G/C | 0.1857 | likely_benign | 0.1878 | benign | -1.032 | Destabilizing | 0.998 | D | 0.622 | neutral | N | 0.506256945 | None | None | N |
G/D | 0.186 | likely_benign | 0.1779 | benign | -1.119 | Destabilizing | 0.861 | D | 0.631 | neutral | N | 0.439666594 | None | None | N |
G/E | 0.1461 | likely_benign | 0.1421 | benign | -1.185 | Destabilizing | 0.956 | D | 0.627 | neutral | None | None | None | None | N |
G/F | 0.2981 | likely_benign | 0.2939 | benign | -1.001 | Destabilizing | 0.994 | D | 0.681 | prob.neutral | None | None | None | None | N |
G/H | 0.2096 | likely_benign | 0.2029 | benign | -1.218 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
G/I | 0.1348 | likely_benign | 0.1345 | benign | -0.298 | Destabilizing | 0.917 | D | 0.669 | neutral | None | None | None | None | N |
G/K | 0.2155 | likely_benign | 0.2079 | benign | -1.286 | Destabilizing | 0.956 | D | 0.622 | neutral | None | None | None | None | N |
G/L | 0.1755 | likely_benign | 0.1739 | benign | -0.298 | Destabilizing | 0.917 | D | 0.634 | neutral | None | None | None | None | N |
G/M | 0.231 | likely_benign | 0.2265 | benign | -0.327 | Destabilizing | 0.994 | D | 0.639 | neutral | None | None | None | None | N |
G/N | 0.1799 | likely_benign | 0.1758 | benign | -0.983 | Destabilizing | 0.987 | D | 0.605 | neutral | None | None | None | None | N |
G/P | 0.8463 | likely_pathogenic | 0.8481 | pathogenic | -0.373 | Destabilizing | 0.983 | D | 0.637 | neutral | None | None | None | None | N |
G/Q | 0.185 | likely_benign | 0.1826 | benign | -1.166 | Destabilizing | 0.994 | D | 0.659 | neutral | None | None | None | None | N |
G/R | 0.1436 | likely_benign | 0.1407 | benign | -0.937 | Destabilizing | 0.983 | D | 0.637 | neutral | N | 0.430604393 | None | None | N |
G/S | 0.0777 | likely_benign | 0.0772 | benign | -1.235 | Destabilizing | 0.037 | N | 0.401 | neutral | N | 0.387890979 | None | None | N |
G/T | 0.0829 | likely_benign | 0.0816 | benign | -1.215 | Destabilizing | 0.227 | N | 0.331 | neutral | None | None | None | None | N |
G/V | 0.0956 | likely_benign | 0.0957 | benign | -0.373 | Destabilizing | 0.182 | N | 0.391 | neutral | N | 0.408420967 | None | None | N |
G/W | 0.2387 | likely_benign | 0.2379 | benign | -1.344 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
G/Y | 0.2478 | likely_benign | 0.2416 | benign | -0.927 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.