Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8552 | 25879;25880;25881 | chr2:178715760;178715759;178715758 | chr2:179580487;179580486;179580485 |
N2AB | 8235 | 24928;24929;24930 | chr2:178715760;178715759;178715758 | chr2:179580487;179580486;179580485 |
N2A | 7308 | 22147;22148;22149 | chr2:178715760;178715759;178715758 | chr2:179580487;179580486;179580485 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs940884256 | -0.629 | 0.003 | N | 0.135 | 0.213 | 0.379020345274 | gnomAD-2.1.1 | 5E-06 | None | None | None | None | N | None | 8.43E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs940884256 | -0.629 | 0.003 | N | 0.135 | 0.213 | 0.379020345274 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs940884256 | -0.629 | 0.003 | N | 0.135 | 0.213 | 0.379020345274 | gnomAD-4.0.0 | 5.05384E-06 | None | None | None | None | N | None | 9.42177E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.63068E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5002 | ambiguous | 0.5299 | ambiguous | -1.197 | Destabilizing | 0.359 | N | 0.343 | neutral | None | None | None | None | N |
I/C | 0.8092 | likely_pathogenic | 0.824 | pathogenic | -0.81 | Destabilizing | 0.996 | D | 0.355 | neutral | None | None | None | None | N |
I/D | 0.8871 | likely_pathogenic | 0.8962 | pathogenic | -0.544 | Destabilizing | 0.905 | D | 0.389 | neutral | None | None | None | None | N |
I/E | 0.7682 | likely_pathogenic | 0.7778 | pathogenic | -0.567 | Destabilizing | 0.875 | D | 0.398 | neutral | None | None | None | None | N |
I/F | 0.2025 | likely_benign | 0.2119 | benign | -0.762 | Destabilizing | 0.853 | D | 0.355 | neutral | N | 0.47049146 | None | None | N |
I/G | 0.7542 | likely_pathogenic | 0.7675 | pathogenic | -1.465 | Destabilizing | 0.73 | D | 0.381 | neutral | None | None | None | None | N |
I/H | 0.5848 | likely_pathogenic | 0.6092 | pathogenic | -0.496 | Destabilizing | 0.989 | D | 0.36 | neutral | None | None | None | None | N |
I/K | 0.5841 | likely_pathogenic | 0.5989 | pathogenic | -0.828 | Destabilizing | 0.219 | N | 0.39 | neutral | None | None | None | None | N |
I/L | 0.115 | likely_benign | 0.1162 | benign | -0.561 | Destabilizing | 0.005 | N | 0.182 | neutral | N | 0.46278773 | None | None | N |
I/M | 0.1315 | likely_benign | 0.135 | benign | -0.538 | Destabilizing | 0.635 | D | 0.376 | neutral | N | 0.453401163 | None | None | N |
I/N | 0.4178 | ambiguous | 0.4347 | ambiguous | -0.682 | Destabilizing | 0.878 | D | 0.396 | neutral | N | 0.457769256 | None | None | N |
I/P | 0.889 | likely_pathogenic | 0.8859 | pathogenic | -0.74 | Destabilizing | 0.951 | D | 0.402 | neutral | None | None | None | None | N |
I/Q | 0.511 | ambiguous | 0.522 | ambiguous | -0.862 | Destabilizing | 0.889 | D | 0.38 | neutral | None | None | None | None | N |
I/R | 0.479 | ambiguous | 0.4954 | ambiguous | -0.193 | Destabilizing | 0.791 | D | 0.396 | neutral | None | None | None | None | N |
I/S | 0.3704 | ambiguous | 0.3904 | ambiguous | -1.253 | Destabilizing | 0.506 | D | 0.373 | neutral | N | 0.486627381 | None | None | N |
I/T | 0.2919 | likely_benign | 0.3186 | benign | -1.163 | Destabilizing | 0.003 | N | 0.135 | neutral | N | 0.413188415 | None | None | N |
I/V | 0.0896 | likely_benign | 0.0929 | benign | -0.74 | Destabilizing | None | N | 0.108 | neutral | N | 0.391503634 | None | None | N |
I/W | 0.7829 | likely_pathogenic | 0.7924 | pathogenic | -0.787 | Destabilizing | 0.997 | D | 0.422 | neutral | None | None | None | None | N |
I/Y | 0.5732 | likely_pathogenic | 0.5888 | pathogenic | -0.579 | Destabilizing | 0.732 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.