Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8554 | 25885;25886;25887 | chr2:178715754;178715753;178715752 | chr2:179580481;179580480;179580479 |
N2AB | 8237 | 24934;24935;24936 | chr2:178715754;178715753;178715752 | chr2:179580481;179580480;179580479 |
N2A | 7310 | 22153;22154;22155 | chr2:178715754;178715753;178715752 | chr2:179580481;179580480;179580479 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs201945791 | 0.537 | 0.992 | N | 0.649 | 0.259 | None | gnomAD-2.1.1 | 1.15357E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.38E-05 | 2.05991E-04 | 7.92644E-04 |
K/E | rs201945791 | 0.537 | 0.992 | N | 0.649 | 0.259 | None | gnomAD-3.1.2 | 1.11732E-04 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88184E-04 | 0 | None | 3.76648E-04 | 0 | 1.76424E-04 | 0 | 0 |
K/E | rs201945791 | 0.537 | 0.992 | N | 0.649 | 0.259 | None | gnomAD-4.0.0 | 8.32718E-05 | None | None | None | None | N | None | 0 | 0 | None | 6.88089E-05 | 2.27967E-05 | None | 2.88785E-04 | 0 | 9.27845E-05 | 0 | 4.88647E-05 |
K/N | rs568546539 | 0.053 | 0.999 | N | 0.733 | 0.238 | 0.152612264143 | gnomAD-2.1.1 | 4.92E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.83054E-04 | None | 0 | 0 | 0 |
K/N | rs568546539 | 0.053 | 0.999 | N | 0.733 | 0.238 | 0.152612264143 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 6.22148E-04 | 0 |
K/N | rs568546539 | 0.053 | 0.999 | N | 0.733 | 0.238 | 0.152612264143 | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 2E-03 | None |
K/N | rs568546539 | 0.053 | 0.999 | N | 0.733 | 0.238 | 0.152612264143 | gnomAD-4.0.0 | 1.26109E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.28556E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8425 | likely_pathogenic | 0.8279 | pathogenic | -0.353 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/C | 0.9584 | likely_pathogenic | 0.9509 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/D | 0.9161 | likely_pathogenic | 0.9077 | pathogenic | 0.495 | Stabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
K/E | 0.7339 | likely_pathogenic | 0.7114 | pathogenic | 0.574 | Stabilizing | 0.992 | D | 0.649 | neutral | N | 0.510445604 | None | None | N |
K/F | 0.9538 | likely_pathogenic | 0.9483 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
K/G | 0.8605 | likely_pathogenic | 0.8527 | pathogenic | -0.639 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/H | 0.6232 | likely_pathogenic | 0.6003 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/I | 0.788 | likely_pathogenic | 0.7576 | pathogenic | 0.353 | Stabilizing | 0.982 | D | 0.789 | deleterious | None | None | None | None | N |
K/L | 0.7602 | likely_pathogenic | 0.7387 | pathogenic | 0.353 | Stabilizing | 0.982 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/M | 0.6115 | likely_pathogenic | 0.5854 | pathogenic | 0.05 | Stabilizing | 0.998 | D | 0.714 | prob.delet. | N | 0.488243774 | None | None | N |
K/N | 0.8144 | likely_pathogenic | 0.8034 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.453917687 | None | None | N |
K/P | 0.7983 | likely_pathogenic | 0.7923 | pathogenic | 0.147 | Stabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
K/Q | 0.4117 | ambiguous | 0.3966 | ambiguous | -0.075 | Destabilizing | 0.994 | D | 0.705 | prob.neutral | N | 0.455047004 | None | None | N |
K/R | 0.1258 | likely_benign | 0.1201 | benign | -0.118 | Destabilizing | 0.987 | D | 0.581 | neutral | N | 0.472620721 | None | None | N |
K/S | 0.875 | likely_pathogenic | 0.8654 | pathogenic | -0.696 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/T | 0.6418 | likely_pathogenic | 0.6133 | pathogenic | -0.424 | Destabilizing | 0.998 | D | 0.775 | deleterious | N | 0.456199093 | None | None | N |
K/V | 0.7694 | likely_pathogenic | 0.7389 | pathogenic | 0.147 | Stabilizing | 0.987 | D | 0.777 | deleterious | None | None | None | None | N |
K/W | 0.9402 | likely_pathogenic | 0.9319 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/Y | 0.8646 | likely_pathogenic | 0.852 | pathogenic | 0.161 | Stabilizing | 0.997 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.