Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8555 | 25888;25889;25890 | chr2:178715751;178715750;178715749 | chr2:179580478;179580477;179580476 |
N2AB | 8238 | 24937;24938;24939 | chr2:178715751;178715750;178715749 | chr2:179580478;179580477;179580476 |
N2A | 7311 | 22156;22157;22158 | chr2:178715751;178715750;178715749 | chr2:179580478;179580477;179580476 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 1.0 | D | 0.863 | 0.354 | 0.721541066513 | gnomAD-4.0.0 | 6.96823E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.11472E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7366 | likely_pathogenic | 0.7394 | pathogenic | -2.31 | Highly Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/C | 0.9338 | likely_pathogenic | 0.931 | pathogenic | -1.59 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/D | 0.9946 | likely_pathogenic | 0.9939 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/E | 0.9646 | likely_pathogenic | 0.9611 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/F | 0.6882 | likely_pathogenic | 0.6872 | pathogenic | -1.381 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
L/G | 0.9485 | likely_pathogenic | 0.9491 | pathogenic | -2.815 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/H | 0.9598 | likely_pathogenic | 0.955 | pathogenic | -2.217 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/I | 0.1947 | likely_benign | 0.2028 | benign | -0.884 | Destabilizing | 0.963 | D | 0.552 | neutral | N | 0.477193865 | None | None | N |
L/K | 0.9663 | likely_pathogenic | 0.963 | pathogenic | -1.576 | Destabilizing | 0.992 | D | 0.846 | deleterious | None | None | None | None | N |
L/M | 0.2311 | likely_benign | 0.239 | benign | -0.814 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
L/N | 0.9649 | likely_pathogenic | 0.9612 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/P | 0.5705 | likely_pathogenic | 0.5658 | pathogenic | -1.336 | Destabilizing | 1.0 | D | 0.872 | deleterious | N | 0.472023288 | None | None | N |
L/Q | 0.8822 | likely_pathogenic | 0.8732 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.528912964 | None | None | N |
L/R | 0.9399 | likely_pathogenic | 0.9344 | pathogenic | -1.271 | Destabilizing | 0.999 | D | 0.861 | deleterious | D | 0.528912964 | None | None | N |
L/S | 0.9426 | likely_pathogenic | 0.9389 | pathogenic | -2.448 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/T | 0.7321 | likely_pathogenic | 0.7296 | pathogenic | -2.137 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/V | 0.2148 | likely_benign | 0.2194 | benign | -1.336 | Destabilizing | 0.972 | D | 0.529 | neutral | N | 0.471282063 | None | None | N |
L/W | 0.9049 | likely_pathogenic | 0.899 | pathogenic | -1.674 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/Y | 0.9636 | likely_pathogenic | 0.9615 | pathogenic | -1.407 | Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.