Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8556 | 25891;25892;25893 | chr2:178715748;178715747;178715746 | chr2:179580475;179580474;179580473 |
N2AB | 8239 | 24940;24941;24942 | chr2:178715748;178715747;178715746 | chr2:179580475;179580474;179580473 |
N2A | 7312 | 22159;22160;22161 | chr2:178715748;178715747;178715746 | chr2:179580475;179580474;179580473 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.079 | 0.07 | 0.16115917748 | gnomAD-4.0.0 | 3.31776E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.95813E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1676 | likely_benign | 0.1561 | benign | -0.638 | Destabilizing | 0.006 | N | 0.338 | neutral | N | 0.459833171 | None | None | N |
E/C | 0.8599 | likely_pathogenic | 0.8475 | pathogenic | -0.373 | Destabilizing | 0.598 | D | 0.458 | neutral | None | None | None | None | N |
E/D | 0.0833 | likely_benign | 0.0774 | benign | -0.63 | Destabilizing | None | N | 0.079 | neutral | N | 0.48437651 | None | None | N |
E/F | 0.7273 | likely_pathogenic | 0.6842 | pathogenic | -0.007 | Destabilizing | 0.422 | N | 0.451 | neutral | None | None | None | None | N |
E/G | 0.1979 | likely_benign | 0.1788 | benign | -0.945 | Destabilizing | 0.019 | N | 0.347 | neutral | N | 0.475633248 | None | None | N |
E/H | 0.5076 | ambiguous | 0.4614 | ambiguous | 0.074 | Stabilizing | 0.146 | N | 0.393 | neutral | None | None | None | None | N |
E/I | 0.3966 | ambiguous | 0.3497 | ambiguous | 0.181 | Stabilizing | 0.101 | N | 0.521 | neutral | None | None | None | None | N |
E/K | 0.3019 | likely_benign | 0.2724 | benign | -0.103 | Destabilizing | None | N | 0.11 | neutral | N | 0.483547004 | None | None | N |
E/L | 0.369 | ambiguous | 0.3231 | benign | 0.181 | Stabilizing | 0.016 | N | 0.447 | neutral | None | None | None | None | N |
E/M | 0.5199 | ambiguous | 0.4733 | ambiguous | 0.347 | Stabilizing | 0.188 | N | 0.437 | neutral | None | None | None | None | N |
E/N | 0.263 | likely_benign | 0.2282 | benign | -0.688 | Destabilizing | 0.004 | N | 0.309 | neutral | None | None | None | None | N |
E/P | 0.3657 | ambiguous | 0.3519 | ambiguous | -0.071 | Destabilizing | None | N | 0.15 | neutral | None | None | None | None | N |
E/Q | 0.1678 | likely_benign | 0.1608 | benign | -0.553 | Destabilizing | 0.018 | N | 0.321 | neutral | N | 0.481893565 | None | None | N |
E/R | 0.4224 | ambiguous | 0.3932 | ambiguous | 0.259 | Stabilizing | 0.017 | N | 0.317 | neutral | None | None | None | None | N |
E/S | 0.1991 | likely_benign | 0.1806 | benign | -0.898 | Destabilizing | 0.004 | N | 0.299 | neutral | None | None | None | None | N |
E/T | 0.2811 | likely_benign | 0.2512 | benign | -0.63 | Destabilizing | 0.025 | N | 0.372 | neutral | None | None | None | None | N |
E/V | 0.2342 | likely_benign | 0.2119 | benign | -0.071 | Destabilizing | 0.017 | N | 0.428 | neutral | N | 0.51379534 | None | None | N |
E/W | 0.8908 | likely_pathogenic | 0.8825 | pathogenic | 0.302 | Stabilizing | 0.88 | D | 0.525 | neutral | None | None | None | None | N |
E/Y | 0.5976 | likely_pathogenic | 0.5549 | ambiguous | 0.267 | Stabilizing | 0.661 | D | 0.438 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.