Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8557 | 25894;25895;25896 | chr2:178715745;178715744;178715743 | chr2:179580472;179580471;179580470 |
N2AB | 8240 | 24943;24944;24945 | chr2:178715745;178715744;178715743 | chr2:179580472;179580471;179580470 |
N2A | 7313 | 22162;22163;22164 | chr2:178715745;178715744;178715743 | chr2:179580472;179580471;179580470 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.001 | N | 0.283 | 0.047 | 0.126345400529 | gnomAD-4.0.0 | 1.65379E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0667 | likely_benign | 0.0625 | benign | -0.15 | Destabilizing | None | N | 0.131 | neutral | N | 0.432408894 | None | None | N |
P/C | 0.5738 | likely_pathogenic | 0.4861 | ambiguous | -0.547 | Destabilizing | 0.201 | N | 0.375 | neutral | None | None | None | None | N |
P/D | 0.4241 | ambiguous | 0.3297 | benign | -0.034 | Destabilizing | 0.001 | N | 0.3 | neutral | None | None | None | None | N |
P/E | 0.3384 | likely_benign | 0.2419 | benign | -0.163 | Destabilizing | None | N | 0.299 | neutral | None | None | None | None | N |
P/F | 0.4673 | ambiguous | 0.3766 | ambiguous | -0.592 | Destabilizing | 0.214 | N | 0.391 | neutral | None | None | None | None | N |
P/G | 0.2286 | likely_benign | 0.195 | benign | -0.219 | Destabilizing | 0.002 | N | 0.307 | neutral | None | None | None | None | N |
P/H | 0.2156 | likely_benign | 0.1535 | benign | 0.057 | Stabilizing | 0.037 | N | 0.375 | neutral | N | 0.509426883 | None | None | N |
P/I | 0.3098 | likely_benign | 0.229 | benign | -0.127 | Destabilizing | 0.214 | N | 0.398 | neutral | None | None | None | None | N |
P/K | 0.3382 | likely_benign | 0.2359 | benign | -0.063 | Destabilizing | 0.008 | N | 0.295 | neutral | None | None | None | None | N |
P/L | 0.1382 | likely_benign | 0.1094 | benign | -0.127 | Destabilizing | 0.028 | N | 0.357 | neutral | N | 0.494534789 | None | None | N |
P/M | 0.2945 | likely_benign | 0.2301 | benign | -0.215 | Destabilizing | 0.093 | N | 0.375 | neutral | None | None | None | None | N |
P/N | 0.2468 | likely_benign | 0.1773 | benign | 0.153 | Stabilizing | 0.002 | N | 0.337 | neutral | None | None | None | None | N |
P/Q | 0.1659 | likely_benign | 0.1075 | benign | -0.084 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | N |
P/R | 0.2555 | likely_benign | 0.1898 | benign | 0.348 | Stabilizing | 0.014 | N | 0.389 | neutral | N | 0.499652607 | None | None | N |
P/S | 0.1077 | likely_benign | 0.086 | benign | -0.173 | Destabilizing | None | N | 0.132 | neutral | N | 0.41497514 | None | None | N |
P/T | 0.0976 | likely_benign | 0.0752 | benign | -0.205 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.489358255 | None | None | N |
P/V | 0.2014 | likely_benign | 0.1596 | benign | -0.104 | Destabilizing | 0.007 | N | 0.331 | neutral | None | None | None | None | N |
P/W | 0.6666 | likely_pathogenic | 0.5604 | ambiguous | -0.672 | Destabilizing | 0.758 | D | 0.404 | neutral | None | None | None | None | N |
P/Y | 0.4164 | ambiguous | 0.3277 | benign | -0.337 | Destabilizing | 0.214 | N | 0.4 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.