Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8561 | 25906;25907;25908 | chr2:178715733;178715732;178715731 | chr2:179580460;179580459;179580458 |
N2AB | 8244 | 24955;24956;24957 | chr2:178715733;178715732;178715731 | chr2:179580460;179580459;179580458 |
N2A | 7317 | 22174;22175;22176 | chr2:178715733;178715732;178715731 | chr2:179580460;179580459;179580458 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.024 | N | 0.466 | 0.285 | 0.529110813561 | gnomAD-4.0.0 | 6.92609E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07438E-07 | 0 | 0 |
V/M | None | None | 0.172 | N | 0.423 | 0.337 | 0.549249573952 | gnomAD-4.0.0 | 6.23348E-06 | None | None | None | None | I | None | 3.01132E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.2595E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2535 | likely_benign | 0.2862 | benign | -1.785 | Destabilizing | 0.312 | N | 0.496 | neutral | N | 0.510897547 | None | None | I |
V/C | 0.7811 | likely_pathogenic | 0.8356 | pathogenic | -1.269 | Destabilizing | 0.996 | D | 0.565 | neutral | None | None | None | None | I |
V/D | 0.7663 | likely_pathogenic | 0.8148 | pathogenic | -1.917 | Destabilizing | 0.981 | D | 0.674 | neutral | None | None | None | None | I |
V/E | 0.5083 | ambiguous | 0.5906 | pathogenic | -1.819 | Destabilizing | 0.862 | D | 0.609 | neutral | N | 0.518558201 | None | None | I |
V/F | 0.2571 | likely_benign | 0.3135 | benign | -1.122 | Destabilizing | 0.95 | D | 0.623 | neutral | None | None | None | None | I |
V/G | 0.3904 | ambiguous | 0.4391 | ambiguous | -2.206 | Highly Destabilizing | 0.022 | N | 0.422 | neutral | N | 0.509417169 | None | None | I |
V/H | 0.7334 | likely_pathogenic | 0.8146 | pathogenic | -1.818 | Destabilizing | 0.997 | D | 0.637 | neutral | None | None | None | None | I |
V/I | 0.0875 | likely_benign | 0.0927 | benign | -0.679 | Destabilizing | 0.085 | N | 0.487 | neutral | None | None | None | None | I |
V/K | 0.5259 | ambiguous | 0.6334 | pathogenic | -1.635 | Destabilizing | 0.899 | D | 0.611 | neutral | None | None | None | None | I |
V/L | 0.1675 | likely_benign | 0.251 | benign | -0.679 | Destabilizing | 0.024 | N | 0.466 | neutral | N | 0.490499538 | None | None | I |
V/M | 0.163 | likely_benign | 0.2009 | benign | -0.59 | Destabilizing | 0.172 | N | 0.423 | neutral | N | 0.515911629 | None | None | I |
V/N | 0.6437 | likely_pathogenic | 0.7235 | pathogenic | -1.613 | Destabilizing | 0.728 | D | 0.676 | prob.neutral | None | None | None | None | I |
V/P | 0.9227 | likely_pathogenic | 0.9503 | pathogenic | -1.016 | Destabilizing | 0.891 | D | 0.618 | neutral | None | None | None | None | I |
V/Q | 0.4219 | ambiguous | 0.5381 | ambiguous | -1.643 | Destabilizing | 0.927 | D | 0.613 | neutral | None | None | None | None | I |
V/R | 0.4518 | ambiguous | 0.5769 | pathogenic | -1.223 | Destabilizing | 0.95 | D | 0.675 | prob.neutral | None | None | None | None | I |
V/S | 0.4024 | ambiguous | 0.47 | ambiguous | -2.188 | Highly Destabilizing | 0.911 | D | 0.595 | neutral | None | None | None | None | I |
V/T | 0.2866 | likely_benign | 0.3213 | benign | -1.973 | Destabilizing | 0.54 | D | 0.549 | neutral | None | None | None | None | I |
V/W | 0.8596 | likely_pathogenic | 0.9206 | pathogenic | -1.481 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
V/Y | 0.7051 | likely_pathogenic | 0.7843 | pathogenic | -1.151 | Destabilizing | 0.975 | D | 0.603 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.