Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8563 | 25912;25913;25914 | chr2:178715727;178715726;178715725 | chr2:179580454;179580453;179580452 |
N2AB | 8246 | 24961;24962;24963 | chr2:178715727;178715726;178715725 | chr2:179580454;179580453;179580452 |
N2A | 7319 | 22180;22181;22182 | chr2:178715727;178715726;178715725 | chr2:179580454;179580453;179580452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.002 | N | 0.147 | 0.038 | 0.126345400529 | gnomAD-4.0.0 | 2.76474E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.6242E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1606 | likely_benign | 0.1535 | benign | -0.491 | Destabilizing | 0.27 | N | 0.315 | neutral | None | None | None | None | I |
Q/C | 0.6314 | likely_pathogenic | 0.5909 | pathogenic | 0.067 | Stabilizing | 0.978 | D | 0.35 | neutral | None | None | None | None | I |
Q/D | 0.4668 | ambiguous | 0.422 | ambiguous | -0.368 | Destabilizing | 0.212 | N | 0.26 | neutral | None | None | None | None | I |
Q/E | 0.078 | likely_benign | 0.0734 | benign | -0.324 | Destabilizing | 0.002 | N | 0.147 | neutral | N | 0.370373427 | None | None | I |
Q/F | 0.7387 | likely_pathogenic | 0.6704 | pathogenic | -0.323 | Destabilizing | 0.777 | D | 0.381 | neutral | None | None | None | None | I |
Q/G | 0.2295 | likely_benign | 0.2192 | benign | -0.797 | Destabilizing | 0.641 | D | 0.402 | neutral | None | None | None | None | I |
Q/H | 0.276 | likely_benign | 0.2261 | benign | -0.686 | Destabilizing | 0.004 | N | 0.22 | neutral | N | 0.455830245 | None | None | I |
Q/I | 0.38 | ambiguous | 0.3444 | ambiguous | 0.262 | Stabilizing | 0.555 | D | 0.408 | neutral | None | None | None | None | I |
Q/K | 0.0719 | likely_benign | 0.0676 | benign | -0.251 | Destabilizing | 0.1 | N | 0.341 | neutral | N | 0.466038678 | None | None | I |
Q/L | 0.172 | likely_benign | 0.1495 | benign | 0.262 | Stabilizing | 0.1 | N | 0.37 | neutral | N | 0.428269724 | None | None | I |
Q/M | 0.3359 | likely_benign | 0.3139 | benign | 0.668 | Stabilizing | 0.06 | N | 0.234 | neutral | None | None | None | None | I |
Q/N | 0.3421 | ambiguous | 0.3022 | benign | -0.692 | Destabilizing | 0.349 | N | 0.231 | neutral | None | None | None | None | I |
Q/P | 0.1464 | likely_benign | 0.1285 | benign | 0.042 | Stabilizing | 0.742 | D | 0.359 | neutral | N | 0.476178314 | None | None | I |
Q/R | 0.0896 | likely_benign | 0.0839 | benign | -0.121 | Destabilizing | None | N | 0.086 | neutral | N | 0.467193472 | None | None | I |
Q/S | 0.2745 | likely_benign | 0.2547 | benign | -0.747 | Destabilizing | 0.472 | N | 0.247 | neutral | None | None | None | None | I |
Q/T | 0.2157 | likely_benign | 0.1981 | benign | -0.521 | Destabilizing | 0.065 | N | 0.327 | neutral | None | None | None | None | I |
Q/V | 0.2457 | likely_benign | 0.229 | benign | 0.042 | Stabilizing | 0.097 | N | 0.381 | neutral | None | None | None | None | I |
Q/W | 0.5827 | likely_pathogenic | 0.4938 | ambiguous | -0.207 | Destabilizing | 0.995 | D | 0.37 | neutral | None | None | None | None | I |
Q/Y | 0.5062 | ambiguous | 0.4343 | ambiguous | 0.003 | Stabilizing | 0.777 | D | 0.345 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.