Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8564 | 25915;25916;25917 | chr2:178715724;178715723;178715722 | chr2:179580451;179580450;179580449 |
N2AB | 8247 | 24964;24965;24966 | chr2:178715724;178715723;178715722 | chr2:179580451;179580450;179580449 |
N2A | 7320 | 22183;22184;22185 | chr2:178715724;178715723;178715722 | chr2:179580451;179580450;179580449 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs770623711 | -0.471 | None | N | 0.211 | 0.084 | 0.0297737177859 | gnomAD-2.1.1 | 8.91E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.02E-05 | 0 |
D/G | rs770623711 | -0.471 | None | N | 0.211 | 0.084 | 0.0297737177859 | gnomAD-4.0.0 | 2.07109E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7158E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1106 | likely_benign | 0.1195 | benign | -0.293 | Destabilizing | None | N | 0.201 | neutral | D | 0.528133727 | None | None | I |
D/C | 0.3734 | ambiguous | 0.3925 | ambiguous | 0.067 | Stabilizing | 0.112 | N | 0.511 | neutral | None | None | None | None | I |
D/E | 0.1096 | likely_benign | 0.1218 | benign | -0.383 | Destabilizing | 0.001 | N | 0.355 | neutral | N | 0.455809482 | None | None | I |
D/F | 0.3517 | ambiguous | 0.3627 | ambiguous | -0.353 | Destabilizing | 0.171 | N | 0.511 | neutral | None | None | None | None | I |
D/G | 0.0571 | likely_benign | 0.0645 | benign | -0.491 | Destabilizing | None | N | 0.211 | neutral | N | 0.272564452 | None | None | I |
D/H | 0.1199 | likely_benign | 0.1198 | benign | -0.319 | Destabilizing | None | N | 0.229 | neutral | N | 0.432049975 | None | None | I |
D/I | 0.3208 | likely_benign | 0.3218 | benign | 0.179 | Stabilizing | 0.055 | N | 0.52 | neutral | None | None | None | None | I |
D/K | 0.1632 | likely_benign | 0.1751 | benign | 0.206 | Stabilizing | 0.012 | N | 0.401 | neutral | None | None | None | None | I |
D/L | 0.2268 | likely_benign | 0.2426 | benign | 0.179 | Stabilizing | 0.029 | N | 0.464 | neutral | None | None | None | None | I |
D/M | 0.4036 | ambiguous | 0.4112 | ambiguous | 0.38 | Stabilizing | 0.322 | N | 0.518 | neutral | None | None | None | None | I |
D/N | 0.0638 | likely_benign | 0.0609 | benign | 0.013 | Stabilizing | None | N | 0.165 | neutral | N | 0.393203585 | None | None | I |
D/P | 0.6004 | likely_pathogenic | 0.6039 | pathogenic | 0.044 | Stabilizing | 0.002 | N | 0.469 | neutral | None | None | None | None | I |
D/Q | 0.1555 | likely_benign | 0.1693 | benign | 0.023 | Stabilizing | 0.022 | N | 0.357 | neutral | None | None | None | None | I |
D/R | 0.1705 | likely_benign | 0.1859 | benign | 0.321 | Stabilizing | 0.055 | N | 0.471 | neutral | None | None | None | None | I |
D/S | 0.084 | likely_benign | 0.0866 | benign | -0.12 | Destabilizing | None | N | 0.144 | neutral | None | None | None | None | I |
D/T | 0.1696 | likely_benign | 0.1666 | benign | 0.025 | Stabilizing | 0.002 | N | 0.404 | neutral | None | None | None | None | I |
D/V | 0.2039 | likely_benign | 0.2065 | benign | 0.044 | Stabilizing | 0.004 | N | 0.477 | neutral | D | 0.528480444 | None | None | I |
D/W | 0.6062 | likely_pathogenic | 0.6392 | pathogenic | -0.264 | Destabilizing | 0.828 | D | 0.503 | neutral | None | None | None | None | I |
D/Y | 0.1289 | likely_benign | 0.1269 | benign | -0.132 | Destabilizing | 0.072 | N | 0.525 | neutral | N | 0.510068041 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.