Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8568 | 25927;25928;25929 | chr2:178715712;178715711;178715710 | chr2:179580439;179580438;179580437 |
N2AB | 8251 | 24976;24977;24978 | chr2:178715712;178715711;178715710 | chr2:179580439;179580438;179580437 |
N2A | 7324 | 22195;22196;22197 | chr2:178715712;178715711;178715710 | chr2:179580439;179580438;179580437 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/M | None | None | 0.97 | N | 0.62 | 0.217 | 0.254244900254 | gnomAD-4.0.0 | 1.61428E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79861E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/S | None | None | 0.642 | N | 0.547 | 0.158 | 0.117506650769 | gnomAD-4.0.0 | 6.88015E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66478E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2505 | likely_benign | 0.2478 | benign | -0.938 | Destabilizing | 0.495 | N | 0.54 | neutral | None | None | None | None | N |
R/C | 0.162 | likely_benign | 0.1598 | benign | -0.975 | Destabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | N |
R/D | 0.5538 | ambiguous | 0.5467 | ambiguous | -0.013 | Destabilizing | 0.826 | D | 0.588 | neutral | None | None | None | None | N |
R/E | 0.2679 | likely_benign | 0.2643 | benign | 0.151 | Stabilizing | 0.417 | N | 0.609 | neutral | None | None | None | None | N |
R/F | 0.4108 | ambiguous | 0.3987 | ambiguous | -0.581 | Destabilizing | 0.931 | D | 0.649 | neutral | None | None | None | None | N |
R/G | 0.2036 | likely_benign | 0.1988 | benign | -1.266 | Destabilizing | 0.782 | D | 0.558 | neutral | N | 0.498497216 | None | None | N |
R/H | 0.082 | likely_benign | 0.0811 | benign | -1.425 | Destabilizing | 0.933 | D | 0.627 | neutral | None | None | None | None | N |
R/I | 0.1713 | likely_benign | 0.174 | benign | -0.042 | Destabilizing | 0.874 | D | 0.649 | neutral | None | None | None | None | N |
R/K | 0.0957 | likely_benign | 0.0972 | benign | -0.716 | Destabilizing | 0.081 | N | 0.611 | neutral | N | 0.446087481 | None | None | N |
R/L | 0.181 | likely_benign | 0.1806 | benign | -0.042 | Destabilizing | 0.497 | N | 0.555 | neutral | None | None | None | None | N |
R/M | 0.2063 | likely_benign | 0.2028 | benign | -0.571 | Destabilizing | 0.97 | D | 0.62 | neutral | N | 0.46614982 | None | None | N |
R/N | 0.383 | ambiguous | 0.3879 | ambiguous | -0.462 | Destabilizing | 0.826 | D | 0.589 | neutral | None | None | None | None | N |
R/P | 0.8149 | likely_pathogenic | 0.8107 | pathogenic | -0.321 | Destabilizing | 0.971 | D | 0.62 | neutral | None | None | None | None | N |
R/Q | 0.0906 | likely_benign | 0.0906 | benign | -0.505 | Destabilizing | 0.24 | N | 0.455 | neutral | None | None | None | None | N |
R/S | 0.259 | likely_benign | 0.2583 | benign | -1.262 | Destabilizing | 0.642 | D | 0.547 | neutral | N | 0.46896434 | None | None | N |
R/T | 0.1087 | likely_benign | 0.1063 | benign | -0.896 | Destabilizing | 0.02 | N | 0.379 | neutral | N | 0.442679029 | None | None | N |
R/V | 0.2082 | likely_benign | 0.2059 | benign | -0.321 | Destabilizing | 0.417 | N | 0.585 | neutral | None | None | None | None | N |
R/W | 0.1528 | likely_benign | 0.1464 | benign | -0.216 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | N | 0.498750706 | None | None | N |
R/Y | 0.2937 | likely_benign | 0.2823 | benign | 0.028 | Stabilizing | 0.976 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.